Detail information of GWHGAAZE022846


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009803016.10PREDICTED: uncharacterized protein LOC104248461 [Nicotiana sylvestris]
trEMBLtr|K4BWK4|K4BWK4_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc05g006780.2.1}
TAIR10AT1G27100.11E-130Actin cross-linking protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7960278579606815-
GWHAAZE00000006mRNA7960278579606815-
GWHAAZE00000006exon7960278579603093-
GWHAAZE00000006exon7960346479604156-
GWHAAZE00000006exon7960620779606815-
GWHAAZE00000006CDS7960620779606815-
GWHAAZE00000006CDS7960346479604156-
GWHAAZE00000006CDS7960278579603093-
Transcript Sequence

Network for GWHGAAZE022846

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0104


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04601.14DUF56911431.10E-62
PF04601.14DUF5692153552.40E-72
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.113
SRR3591706second leaf12.669
SRR3591707mature leaf24.047
SRR3591708Shoot apex24.103
SRR3591709Stem87.941
SRR3591710White floral bud36.146
SRR3591711White flower44.289
SRR3591712Green floral bud23.655
SRR3591713Yellow flower30.450
SRP173429 SRR8316895Juvenile bud stage 75.705
SRR8316896Juvenile bud stage 71.518
SRR8316897Juvenile bud stage 71.539
SRR8316894Third green stage 12.974
SRR8316900Third green stage 27.221
SRR8316901Third green stage 45.376
SRR8316898Complete white stage 9.136
SRR8316899Complete white stage 78.797
SRR8316903Complete white stage 18.814
SRR8316902Silver flowering stage14.298
SRR8316904Silver flowering stage14.111
SRR8316905Silver flowering stage7.727
SRR8316906Gold flowering stage 26.151
SRR8316907Gold flowering stage 25.703
SRR8316908Gold flowering stage 31.356
SRP132670SRR6706286Control33.937
SRR6706287Light intensity 50%32.591
SRR6706288Light intensity 20%30.279
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.690
CNS0095593Slightly white alabastrum(diploid) 244.372
CNS0095594Slightly white alabastrum(diploid) 341.721
CNS0095595Whole white alabastrum(diploid) 241.335
CNS0095596Whole white alabastrum(diploid) 37.707
CNS0095597Whole white alabastrum(diploid) 425.773
CNS0095598Silvery flower (diploied) 183.582
CNS0095599Silvery flower (diploied) 291.181
CNS0095600Silvery flower (diploied) 363.201
CNS0095601Golden flower (diploid) 197.076
CNS0095602Golden flower (diploid) 2100.034
CNS0095603Golden flower (diploid) 398.516
CNS0095604Slightly white alabastrum(tetraploid) 19.101
CNS0095605Slightly white alabastrum(tetraploid) 26.535
CNS0095606Slightly white alabastrum(tetraploid) 320.636
CNS0095607Whole white alabastrum(tetraploid) 16.125
CNS0095608Whole white alabastrum(tetraploid) 23.673
CNS0095609Whole white alabastrum(tetraploid) 312.694
CNS0095610Silvery flower (tetraploid) 119.633
CNS0095611Silvery flower (tetraploid) 225.523
CNS0095612Silvery flower (tetraploid) 329.813
CNS0095613Golden flower (tetraploid) 112.487
CNS0095614Golden flower (tetraploid) 218.219
CNS0095615Golden flower (tetraploid) 319.333
CRA001975CRR073297Stem 137.232
CRR073298Stem 232.247
CRR073299Stem 328.070
CRR073300Leaf 147.346
CRR073301Leaf 268.489
CRR073302Leaf 330.408
CRR073303Juvenile bud 137.340
CRR073304Juvenile bud 227.507
CRR073305Juvenile bud 379.076
CRR073306Third green 148.754
CRR073307Third green 243.925
CRR073308Third green 343.154
CRR073309Second white 130.647
CRR073310Second white 230.138
CRR073311Second white 335.412
CRR073312Silver flowering 140.706
CRR073313Silver flowering 243.272
CRR073314Silver flowering 342.061
CRR073315Gold flowering 198.139
CRR073316Gold flowering 2139.034
CRR073317Gold flowering 372.194
CRR073318Tawny withering 166.791
CRR073319Tawny withering 294.189
CRR073320Tawny withering 394.487