Detail information of GWHGAAZE022919


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrBAF99254.10galactinol synthase [Coptis japonica]
COGYP_004116387.14E-34glycosyl transferase family protein
Swissprottr|Q9XGN4|GOLS1_AJURE0Galactinol synthase 1
trEMBLtr|B0I373|B0I373_COPJA0Galactinol synthase {ECO:0000313|EMBL:BAF99254.1}
TAIR10AT1G60470.16E-146galactinol synthase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8069869480700212-
GWHAAZE00000006mRNA8069869480700212-
GWHAAZE00000006exon8069869480698912-
GWHAAZE00000006exon8069901680699150-
GWHAAZE00000006exon8069924980699569-
GWHAAZE00000006exon8069987780700212-
GWHAAZE00000006CDS8069987780700212-
GWHAAZE00000006CDS8069924980699569-
GWHAAZE00000006CDS8069901680699150-
GWHAAZE00000006CDS8069869480698912-
Transcript Sequence

Network for GWHGAAZE022919

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.21Glyco_transf_8302725.50E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18819GOLS Metabolic pathways map01100
Galactose metabolismmap00052

Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.702
SRR3591706second leaf1542.221
SRR3591707mature leaf10399.096
SRR3591708Shoot apex22.657
SRR3591709Stem468.437
SRR3591710White floral bud24.383
SRR3591711White flower15.538
SRR3591712Green floral bud59.357
SRR3591713Yellow flower17.223
SRP173429 SRR8316895Juvenile bud stage 4.761
SRR8316896Juvenile bud stage 8.387
SRR8316897Juvenile bud stage 6.839
SRR8316894Third green stage 3.203
SRR8316900Third green stage 6.887
SRR8316901Third green stage 7.459
SRR8316898Complete white stage 21.987
SRR8316899Complete white stage 44.330
SRR8316903Complete white stage 26.040
SRR8316902Silver flowering stage6.645
SRR8316904Silver flowering stage21.764
SRR8316905Silver flowering stage5.495
SRR8316906Gold flowering stage 22.762
SRR8316907Gold flowering stage 8.263
SRR8316908Gold flowering stage 26.728
SRP132670SRR6706286Control13.546
SRR6706287Light intensity 50%11.289
SRR6706288Light intensity 20%11.622
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.096
CNS0095593Slightly white alabastrum(diploid) 28.606
CNS0095594Slightly white alabastrum(diploid) 38.690
CNS0095595Whole white alabastrum(diploid) 28.457
CNS0095596Whole white alabastrum(diploid) 323.430
CNS0095597Whole white alabastrum(diploid) 414.828
CNS0095598Silvery flower (diploied) 132.622
CNS0095599Silvery flower (diploied) 271.659
CNS0095600Silvery flower (diploied) 339.054
CNS0095601Golden flower (diploid) 160.466
CNS0095602Golden flower (diploid) 235.812
CNS0095603Golden flower (diploid) 340.386
CNS0095604Slightly white alabastrum(tetraploid) 17.804
CNS0095605Slightly white alabastrum(tetraploid) 27.811
CNS0095606Slightly white alabastrum(tetraploid) 311.321
CNS0095607Whole white alabastrum(tetraploid) 113.240
CNS0095608Whole white alabastrum(tetraploid) 24.415
CNS0095609Whole white alabastrum(tetraploid) 39.443
CNS0095610Silvery flower (tetraploid) 136.284
CNS0095611Silvery flower (tetraploid) 214.093
CNS0095612Silvery flower (tetraploid) 321.875
CNS0095613Golden flower (tetraploid) 10.661
CNS0095614Golden flower (tetraploid) 253.310
CNS0095615Golden flower (tetraploid) 314.911
CRA001975CRR073297Stem 13.130
CRR073298Stem 23.942
CRR073299Stem 34.171
CRR073300Leaf 117.811
CRR073301Leaf 218.560
CRR073302Leaf 316.490
CRR073303Juvenile bud 155.051
CRR073304Juvenile bud 255.901
CRR073305Juvenile bud 375.390
CRR073306Third green 116.798
CRR073307Third green 222.369
CRR073308Third green 348.509
CRR073309Second white 114.180
CRR073310Second white 244.914
CRR073311Second white 315.524
CRR073312Silver flowering 12.273
CRR073313Silver flowering 212.849
CRR073314Silver flowering 33.772
CRR073315Gold flowering 1875.282
CRR073316Gold flowering 2743.180
CRR073317Gold flowering 31029.877
CRR073318Tawny withering 1116.345
CRR073319Tawny withering 2103.263
CRR073320Tawny withering 3186.798