Detail information of GWHGAAZE023008


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011096656.15.90098E-93PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic [Sesamum indicum]
COGYP_001956683.14E-52phosphoribosylformylglycinamidine cyclo-ligase
Swissprottr|P52424|PUR5_VIGUN2E-76Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|A5BS32|A5BS32_VITVI2E-88Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|RuleBase:RU004370}
TAIR10AT3G55010.28E-42phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8197988481982680-
GWHAAZE00000006mRNA8197988481982680-
GWHAAZE00000006exon8197988481980042-
GWHAAZE00000006exon8198035881980464-
GWHAAZE00000006exon8198054881980701-
GWHAAZE00000006exon8198078581980844-
GWHAAZE00000006exon8198094381980970-
GWHAAZE00000006exon8198181981981963-
GWHAAZE00000006exon8198263881982680-
GWHAAZE00000006CDS8198263881982680-
GWHAAZE00000006CDS8198181981981963-
GWHAAZE00000006CDS8198094381980970-
GWHAAZE00000006CDS8198078581980844-
GWHAAZE00000006CDS8198054881980701-
GWHAAZE00000006CDS8198035881980464-
GWHAAZE00000006CDS8197988481980042-
Transcript Sequence

Network for GWHGAAZE023008

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02769.23AIRS_C1442091.10E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01933purM Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.348
SRR3591706second leaf1.334
SRR3591707mature leaf1.766
SRR3591708Shoot apex1.192
SRR3591709Stem2.184
SRR3591710White floral bud3.134
SRR3591711White flower4.659
SRR3591712Green floral bud2.654
SRR3591713Yellow flower2.685
SRP173429 SRR8316895Juvenile bud stage 0.265
SRR8316896Juvenile bud stage 0.280
SRR8316897Juvenile bud stage 0.310
SRR8316894Third green stage 0.141
SRR8316900Third green stage 0.250
SRR8316901Third green stage 0.054
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.064
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.076
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.075
SRR6706287Light intensity 50%0.043
SRR6706288Light intensity 20%0.036
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.206
CNS0095593Slightly white alabastrum(diploid) 20.594
CNS0095594Slightly white alabastrum(diploid) 30.390
CNS0095595Whole white alabastrum(diploid) 20.714
CNS0095596Whole white alabastrum(diploid) 30.532
CNS0095597Whole white alabastrum(diploid) 40.499
CNS0095598Silvery flower (diploied) 10.068
CNS0095599Silvery flower (diploied) 20.194
CNS0095600Silvery flower (diploied) 30.004
CNS0095601Golden flower (diploid) 10.552
CNS0095602Golden flower (diploid) 20.119
CNS0095603Golden flower (diploid) 30.417
CNS0095604Slightly white alabastrum(tetraploid) 10.456
CNS0095605Slightly white alabastrum(tetraploid) 20.791
CNS0095606Slightly white alabastrum(tetraploid) 30.108
CNS0095607Whole white alabastrum(tetraploid) 10.246
CNS0095608Whole white alabastrum(tetraploid) 20.207
CNS0095609Whole white alabastrum(tetraploid) 30.058
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.087
CNS0095613Golden flower (tetraploid) 10.023
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.168
CRR073298Stem 20.238
CRR073299Stem 30.000
CRR073300Leaf 10.094
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.095
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.005
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.032
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.028