Detail information of GWHGAAZE023012


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP26749.10hypothetical protein JCGZ_17907 [Jatropha curcas]
Swissprottr|Q9LU91|SKI14_ARATH8E-125F-box protein SKIP14
trEMBLtr|A0A067K4P2|A0A067K4P2_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP26749.1}
TAIR10AT3G26000.14E-104Ribonuclease inhibitor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8202466082027385+
GWHAAZE00000006mRNA8202466082027385+
GWHAAZE00000006exon8202466082025544+
GWHAAZE00000006exon8202682882027385+
GWHAAZE00000006CDS8202466082025544+
GWHAAZE00000006CDS8202682882027385+
Transcript Sequence

Network for GWHGAAZE023012

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.8F-box-like2072431.10E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.505
SRR3591706second leaf5.995
SRR3591707mature leaf11.521
SRR3591708Shoot apex5.461
SRR3591709Stem11.068
SRR3591710White floral bud18.223
SRR3591711White flower21.117
SRR3591712Green floral bud14.110
SRR3591713Yellow flower19.193
SRP173429 SRR8316895Juvenile bud stage 3.663
SRR8316896Juvenile bud stage 6.871
SRR8316897Juvenile bud stage 2.984
SRR8316894Third green stage 3.800
SRR8316900Third green stage 8.695
SRR8316901Third green stage 7.350
SRR8316898Complete white stage 3.857
SRR8316899Complete white stage 8.967
SRR8316903Complete white stage 8.622
SRR8316902Silver flowering stage4.922
SRR8316904Silver flowering stage7.261
SRR8316905Silver flowering stage3.498
SRR8316906Gold flowering stage 10.682
SRR8316907Gold flowering stage 9.602
SRR8316908Gold flowering stage 9.246
SRP132670SRR6706286Control15.159
SRR6706287Light intensity 50%14.978
SRR6706288Light intensity 20%15.403
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.228
CNS0095593Slightly white alabastrum(diploid) 23.701
CNS0095594Slightly white alabastrum(diploid) 34.332
CNS0095595Whole white alabastrum(diploid) 24.173
CNS0095596Whole white alabastrum(diploid) 35.330
CNS0095597Whole white alabastrum(diploid) 46.782
CNS0095598Silvery flower (diploied) 14.998
CNS0095599Silvery flower (diploied) 22.956
CNS0095600Silvery flower (diploied) 314.637
CNS0095601Golden flower (diploid) 13.480
CNS0095602Golden flower (diploid) 213.872
CNS0095603Golden flower (diploid) 314.088
CNS0095604Slightly white alabastrum(tetraploid) 110.356
CNS0095605Slightly white alabastrum(tetraploid) 26.633
CNS0095606Slightly white alabastrum(tetraploid) 39.759
CNS0095607Whole white alabastrum(tetraploid) 17.491
CNS0095608Whole white alabastrum(tetraploid) 27.164
CNS0095609Whole white alabastrum(tetraploid) 310.211
CNS0095610Silvery flower (tetraploid) 112.663
CNS0095611Silvery flower (tetraploid) 213.793
CNS0095612Silvery flower (tetraploid) 317.863
CNS0095613Golden flower (tetraploid) 16.620
CNS0095614Golden flower (tetraploid) 212.015
CNS0095615Golden flower (tetraploid) 324.921
CRA001975CRR073297Stem 116.812
CRR073298Stem 214.707
CRR073299Stem 312.819
CRR073300Leaf 118.549
CRR073301Leaf 214.436
CRR073302Leaf 310.404
CRR073303Juvenile bud 113.372
CRR073304Juvenile bud 28.977
CRR073305Juvenile bud 316.937
CRR073306Third green 113.552
CRR073307Third green 28.017
CRR073308Third green 39.986
CRR073309Second white 18.018
CRR073310Second white 210.527
CRR073311Second white 317.974
CRR073312Silver flowering 117.462
CRR073313Silver flowering 212.619
CRR073314Silver flowering 313.797
CRR073315Gold flowering 15.321
CRR073316Gold flowering 212.798
CRR073317Gold flowering 34.781
CRR073318Tawny withering 112.435
CRR073319Tawny withering 26.582
CRR073320Tawny withering 37.749