Detail information of GWHGAAZE023044


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279616.10PREDICTED: mannosyl-oligosaccharide glucosidase GCS1 [Vitis vinifera]
Swissprottr|F4HTM3|GCS1_ARATH0Mannosyl-oligosaccharide glucosidase GCS1
trEMBLtr|D7TAV0|D7TAV0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27623.3}
TAIR10AT1G67490.10glucosidase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8249232482505655+
GWHAAZE00000006mRNA8249232482505655+
GWHAAZE00000006exon8249232482492678+
GWHAAZE00000006exon8249276582492831+
GWHAAZE00000006exon8249381582494066+
GWHAAZE00000006exon8249432282494496+
GWHAAZE00000006exon8249583282495918+
GWHAAZE00000006exon8249604782496115+
GWHAAZE00000006exon8249624382496339+
GWHAAZE00000006exon8249674582496783+
GWHAAZE00000006exon8249694982497031+
GWHAAZE00000006exon8249811182498218+
GWHAAZE00000006exon8249978682499907+
GWHAAZE00000006exon8250012382500230+
GWHAAZE00000006exon8250039582500468+
GWHAAZE00000006exon8250106182501186+
GWHAAZE00000006exon8250292382502990+
GWHAAZE00000006exon8250347482503623+
GWHAAZE00000006exon8250373382503783+
GWHAAZE00000006exon8250410582504161+
GWHAAZE00000006exon8250449382504642+
GWHAAZE00000006exon8250484082504931+
GWHAAZE00000006exon8250510182505210+
GWHAAZE00000006exon8250531482505377+
GWHAAZE00000006exon8250548782505655+
GWHAAZE00000006CDS8249232482492678+
GWHAAZE00000006CDS8249276582492831+
GWHAAZE00000006CDS8249381582494066+
GWHAAZE00000006CDS8249432282494496+
GWHAAZE00000006CDS8249583282495918+
GWHAAZE00000006CDS8249604782496115+
GWHAAZE00000006CDS8249624382496339+
GWHAAZE00000006CDS8249674582496783+
GWHAAZE00000006CDS8249694982497031+
GWHAAZE00000006CDS8249811182498218+
GWHAAZE00000006CDS8249978682499907+
GWHAAZE00000006CDS8250012382500230+
GWHAAZE00000006CDS8250039582500468+
GWHAAZE00000006CDS8250106182501186+
GWHAAZE00000006CDS8250292382502990+
GWHAAZE00000006CDS8250347482503623+
GWHAAZE00000006CDS8250373382503783+
GWHAAZE00000006CDS8250410582504161+
GWHAAZE00000006CDS8250449382504642+
GWHAAZE00000006CDS8250484082504931+
GWHAAZE00000006CDS8250510182505210+
GWHAAZE00000006CDS8250531482505377+
GWHAAZE00000006CDS8250548782505631+
GWHAAZE00000006three_prime_UTR8250563282505655+
Transcript Sequence

Network for GWHGAAZE023044

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16923.6Glyco_hydro_63N1242878.90E-42
PF03200.17Glyco_hydro_633838771.70E-219
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01228MOGS Metabolic pathways map01100
N-Glycan biosynthesismap00510
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.770
SRR3591706second leaf15.418
SRR3591707mature leaf11.814
SRR3591708Shoot apex26.259
SRR3591709Stem27.288
SRR3591710White floral bud21.762
SRR3591711White flower22.389
SRR3591712Green floral bud22.273
SRR3591713Yellow flower16.528
SRP173429 SRR8316895Juvenile bud stage 16.357
SRR8316896Juvenile bud stage 21.373
SRR8316897Juvenile bud stage 10.184
SRR8316894Third green stage 8.033
SRR8316900Third green stage 20.518
SRR8316901Third green stage 19.093
SRR8316898Complete white stage 7.754
SRR8316899Complete white stage 22.916
SRR8316903Complete white stage 10.814
SRR8316902Silver flowering stage6.227
SRR8316904Silver flowering stage10.627
SRR8316905Silver flowering stage4.065
SRR8316906Gold flowering stage 13.334
SRR8316907Gold flowering stage 11.460
SRR8316908Gold flowering stage 14.041
SRP132670SRR6706286Control16.542
SRR6706287Light intensity 50%17.083
SRR6706288Light intensity 20%17.422
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.593
CNS0095593Slightly white alabastrum(diploid) 217.656
CNS0095594Slightly white alabastrum(diploid) 316.463
CNS0095595Whole white alabastrum(diploid) 214.911
CNS0095596Whole white alabastrum(diploid) 317.188
CNS0095597Whole white alabastrum(diploid) 414.348
CNS0095598Silvery flower (diploied) 117.313
CNS0095599Silvery flower (diploied) 216.207
CNS0095600Silvery flower (diploied) 314.539
CNS0095601Golden flower (diploid) 116.578
CNS0095602Golden flower (diploid) 215.640
CNS0095603Golden flower (diploid) 316.233
CNS0095604Slightly white alabastrum(tetraploid) 116.052
CNS0095605Slightly white alabastrum(tetraploid) 214.951
CNS0095606Slightly white alabastrum(tetraploid) 324.204
CNS0095607Whole white alabastrum(tetraploid) 112.554
CNS0095608Whole white alabastrum(tetraploid) 210.109
CNS0095609Whole white alabastrum(tetraploid) 318.051
CNS0095610Silvery flower (tetraploid) 116.433
CNS0095611Silvery flower (tetraploid) 216.152
CNS0095612Silvery flower (tetraploid) 313.635
CNS0095613Golden flower (tetraploid) 19.378
CNS0095614Golden flower (tetraploid) 214.515
CNS0095615Golden flower (tetraploid) 37.722
CRA001975CRR073297Stem 121.954
CRR073298Stem 218.993
CRR073299Stem 317.190
CRR073300Leaf 123.583
CRR073301Leaf 218.455
CRR073302Leaf 319.431
CRR073303Juvenile bud 117.637
CRR073304Juvenile bud 29.788
CRR073305Juvenile bud 315.965
CRR073306Third green 15.645
CRR073307Third green 25.195
CRR073308Third green 35.487
CRR073309Second white 16.800
CRR073310Second white 28.268
CRR073311Second white 35.521
CRR073312Silver flowering 14.921
CRR073313Silver flowering 24.575
CRR073314Silver flowering 33.743
CRR073315Gold flowering 18.752
CRR073316Gold flowering 214.522
CRR073317Gold flowering 38.778
CRR073318Tawny withering 116.145
CRR073319Tawny withering 216.940
CRR073320Tawny withering 315.383