Detail information of GWHGAAZE023047


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007044049.10Exostosin family protein isoform 1 [Theobroma cacao]
Swissprottr|Q6DBG8|ARAD1_ARATH6E-88Probable arabinosyltransferase ARAD1
trEMBLtr|A0A061E6A0|A0A061E6A0_THECC0Exostosin family protein isoform 1 {ECO:0000313|EMBL:EOX99881.1}
TAIR10AT1G67410.16E-173Exostosin family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8255955082563818+
GWHAAZE00000006mRNA8255955082563818+
GWHAAZE00000006exon8255955082560026+
GWHAAZE00000006exon8256157882561874+
GWHAAZE00000006exon8256199182562086+
GWHAAZE00000006exon8256334782563818+
GWHAAZE00000006CDS8255955082560026+
GWHAAZE00000006CDS8256157882561874+
GWHAAZE00000006CDS8256199182562086+
GWHAAZE00000006CDS8256334782563763+
GWHAAZE00000006three_prime_UTR8256376482563818+
Transcript Sequence

Network for GWHGAAZE023047

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0033


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03016.16Exostosin473547.20E-76
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.370
SRR3591706second leaf7.723
SRR3591707mature leaf6.344
SRR3591708Shoot apex11.515
SRR3591709Stem14.114
SRR3591710White floral bud9.671
SRR3591711White flower10.733
SRR3591712Green floral bud15.685
SRR3591713Yellow flower5.230
SRP173429 SRR8316895Juvenile bud stage 8.412
SRR8316896Juvenile bud stage 10.999
SRR8316897Juvenile bud stage 4.685
SRR8316894Third green stage 6.110
SRR8316900Third green stage 18.137
SRR8316901Third green stage 16.511
SRR8316898Complete white stage 9.746
SRR8316899Complete white stage 30.661
SRR8316903Complete white stage 11.480
SRR8316902Silver flowering stage6.953
SRR8316904Silver flowering stage8.260
SRR8316905Silver flowering stage3.436
SRR8316906Gold flowering stage 13.223
SRR8316907Gold flowering stage 12.555
SRR8316908Gold flowering stage 14.195
SRP132670SRR6706286Control18.805
SRR6706287Light intensity 50%20.467
SRR6706288Light intensity 20%22.547
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.717
CNS0095593Slightly white alabastrum(diploid) 211.158
CNS0095594Slightly white alabastrum(diploid) 38.552
CNS0095595Whole white alabastrum(diploid) 27.527
CNS0095596Whole white alabastrum(diploid) 37.874
CNS0095597Whole white alabastrum(diploid) 46.422
CNS0095598Silvery flower (diploied) 19.791
CNS0095599Silvery flower (diploied) 28.319
CNS0095600Silvery flower (diploied) 316.313
CNS0095601Golden flower (diploid) 19.836
CNS0095602Golden flower (diploid) 213.895
CNS0095603Golden flower (diploid) 315.772
CNS0095604Slightly white alabastrum(tetraploid) 111.483
CNS0095605Slightly white alabastrum(tetraploid) 210.532
CNS0095606Slightly white alabastrum(tetraploid) 322.814
CNS0095607Whole white alabastrum(tetraploid) 17.577
CNS0095608Whole white alabastrum(tetraploid) 27.095
CNS0095609Whole white alabastrum(tetraploid) 314.495
CNS0095610Silvery flower (tetraploid) 114.868
CNS0095611Silvery flower (tetraploid) 215.870
CNS0095612Silvery flower (tetraploid) 39.284
CNS0095613Golden flower (tetraploid) 16.197
CNS0095614Golden flower (tetraploid) 213.023
CNS0095615Golden flower (tetraploid) 36.802
CRA001975CRR073297Stem 123.603
CRR073298Stem 225.039
CRR073299Stem 329.501
CRR073300Leaf 125.690
CRR073301Leaf 226.055
CRR073302Leaf 333.556
CRR073303Juvenile bud 129.329
CRR073304Juvenile bud 234.653
CRR073305Juvenile bud 333.010
CRR073306Third green 16.923
CRR073307Third green 29.337
CRR073308Third green 39.709
CRR073309Second white 112.387
CRR073310Second white 26.687
CRR073311Second white 37.323
CRR073312Silver flowering 14.822
CRR073313Silver flowering 24.799
CRR073314Silver flowering 34.185
CRR073315Gold flowering 116.446
CRR073316Gold flowering 218.081
CRR073317Gold flowering 313.830
CRR073318Tawny withering 124.868
CRR073319Tawny withering 217.842
CRR073320Tawny withering 322.872