Detail information of GWHGAAZE023050


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010248998.11.03353E-83PREDICTED: mitochondrial import receptor subunit TOM20-like [Nelumbo nucifera]
Swissprottr|P92792|TOM20_SOLTU8E-75Mitochondrial import receptor subunit TOM20
trEMBLtr|W9SL37|W9SL37_9ROSA2E-81Mitochondrial import receptor subunit TOM20 {ECO:0000313|EMBL:EXC35682.1}
TAIR10AT1G27390.15E-46translocase outer membrane 20-2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8259002482592660+
GWHAAZE00000006mRNA8259002482592660+
GWHAAZE00000006exon8259002482590114+
GWHAAZE00000006exon8259021982590388+
GWHAAZE00000006exon8259049582590542+
GWHAAZE00000006exon8259135482591440+
GWHAAZE00000006exon8259253582592660+
GWHAAZE00000006CDS8259002482590114+
GWHAAZE00000006CDS8259021982590388+
GWHAAZE00000006CDS8259049582590542+
GWHAAZE00000006CDS8259135482591440+
GWHAAZE00000006CDS8259253582592660+
Transcript Sequence

Network for GWHGAAZE023050

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0240


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06552.13TOM20_plant41649.70E-76
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf128.511
SRR3591706second leaf78.540
SRR3591707mature leaf51.886
SRR3591708Shoot apex155.631
SRR3591709Stem98.834
SRR3591710White floral bud133.244
SRR3591711White flower171.245
SRR3591712Green floral bud184.958
SRR3591713Yellow flower144.547
SRP173429 SRR8316895Juvenile bud stage 96.612
SRR8316896Juvenile bud stage 121.003
SRR8316897Juvenile bud stage 72.541
SRR8316894Third green stage 52.352
SRR8316900Third green stage 169.251
SRR8316901Third green stage 161.076
SRR8316898Complete white stage 47.007
SRR8316899Complete white stage 132.209
SRR8316903Complete white stage 62.480
SRR8316902Silver flowering stage61.079
SRR8316904Silver flowering stage63.107
SRR8316905Silver flowering stage29.448
SRR8316906Gold flowering stage 84.457
SRR8316907Gold flowering stage 100.780
SRR8316908Gold flowering stage 113.187
SRP132670SRR6706286Control134.019
SRR6706287Light intensity 50%145.385
SRR6706288Light intensity 20%162.509
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1150.051
CNS0095593Slightly white alabastrum(diploid) 2163.542
CNS0095594Slightly white alabastrum(diploid) 3152.012
CNS0095595Whole white alabastrum(diploid) 2135.120
CNS0095596Whole white alabastrum(diploid) 3168.500
CNS0095597Whole white alabastrum(diploid) 4115.915
CNS0095598Silvery flower (diploied) 1111.847
CNS0095599Silvery flower (diploied) 2104.670
CNS0095600Silvery flower (diploied) 388.116
CNS0095601Golden flower (diploid) 196.309
CNS0095602Golden flower (diploid) 288.144
CNS0095603Golden flower (diploid) 382.643
CNS0095604Slightly white alabastrum(tetraploid) 1151.981
CNS0095605Slightly white alabastrum(tetraploid) 2136.293
CNS0095606Slightly white alabastrum(tetraploid) 3127.977
CNS0095607Whole white alabastrum(tetraploid) 1102.079
CNS0095608Whole white alabastrum(tetraploid) 298.096
CNS0095609Whole white alabastrum(tetraploid) 3120.594
CNS0095610Silvery flower (tetraploid) 191.179
CNS0095611Silvery flower (tetraploid) 288.070
CNS0095612Silvery flower (tetraploid) 365.173
CNS0095613Golden flower (tetraploid) 167.797
CNS0095614Golden flower (tetraploid) 279.667
CNS0095615Golden flower (tetraploid) 352.213
CRA001975CRR073297Stem 1123.973
CRR073298Stem 2118.813
CRR073299Stem 3134.351
CRR073300Leaf 1101.996
CRR073301Leaf 2113.543
CRR073302Leaf 3151.649
CRR073303Juvenile bud 1116.114
CRR073304Juvenile bud 290.692
CRR073305Juvenile bud 369.079
CRR073306Third green 130.618
CRR073307Third green 240.765
CRR073308Third green 335.814
CRR073309Second white 140.110
CRR073310Second white 246.341
CRR073311Second white 332.486
CRR073312Silver flowering 129.970
CRR073313Silver flowering 231.614
CRR073314Silver flowering 325.848
CRR073315Gold flowering 153.172
CRR073316Gold flowering 248.249
CRR073317Gold flowering 334.463
CRR073318Tawny withering 172.575
CRR073319Tawny withering 282.068
CRR073320Tawny withering 377.780