Gene detail

Detail information of GWHGAAZE023080

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007043909.1	0	Glucose-6-phosphate 1-dehydrogenase 2 isoform 1 [Theobroma cacao]
COG	YP_005366914.1	3E-129	glucose-6-phosphate 1-dehydrogenase
Swissprot	tr\|Q43793\|G6PDC_TOBAC	0	Glucose-6-phosphate 1-dehydrogenase, chloroplastic (Precursor)
trEMBL	tr\|A0A061E472\|A0A061E472_THECC	0	Glucose-6-phosphate 1-dehydrogenase {ECO:0000256\|RuleBase:RU000497}
TAIR10	AT5G13110.1	0	glucose-6-phosphate dehydrogenase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	83082353	83086645	+
GWHAAZE00000006	mRNA	83082353	83086645	+
GWHAAZE00000006	exon	83082353	83082584	+
GWHAAZE00000006	exon	83083181	83083413	+
GWHAAZE00000006	exon	83083671	83083765	+
GWHAAZE00000006	exon	83083923	83084037	+
GWHAAZE00000006	exon	83084868	83085073	+
GWHAAZE00000006	exon	83085165	83085314	+
GWHAAZE00000006	exon	83085406	83085526	+
GWHAAZE00000006	exon	83085622	83085851	+
GWHAAZE00000006	exon	83085950	83086150	+
GWHAAZE00000006	exon	83086396	83086645	+
GWHAAZE00000006	CDS	83082353	83082584	+
GWHAAZE00000006	CDS	83083181	83083413	+
GWHAAZE00000006	CDS	83083671	83083765	+
GWHAAZE00000006	CDS	83083923	83084037	+
GWHAAZE00000006	CDS	83084868	83085073	+
GWHAAZE00000006	CDS	83085165	83085314	+
GWHAAZE00000006	CDS	83085406	83085526	+
GWHAAZE00000006	CDS	83085622	83085851	+
GWHAAZE00000006	CDS	83085950	83086150	+
GWHAAZE00000006	CDS	83086396	83086645	+

Transcript Sequence
>GWHTAAZE023110 ATGTCGACCCTCTCTTCATCTACTACTACGCATTGTCGTTCCTATTGTTCTTCCTCCTCCTCCTTATCATCATCACCATATTCCAATTTGAATTCTTCTTCTGCAATTTCTGGACCTAATCGTCATCATCGCTCAACCAGATCCTCAATTTGCCCCAATCGTTTGGCCCGCAAAAAGTTTTCTCTTCAATCCAATTCAATTTCATGCTCGAATGTCGTTCGCATGCAAGATGGTGCTGTAACCGCAACAGTTGCCCCTATTGAAGATAAAACTCCTCTCAAAAAATTGAAAGATGGCTTGTATTCGGTTACACCTCCAGAAGAATCTAAAGACACTGCTGATTTTGATATCAATAAAGACAAGTCCACAGTCAGTATCACTGTTGTTGGAGCCTCAGGGGACCTTGCCAAGAAGAAAATATTTCCTGCACTTTTTGCACTTTACTACGAGGGTTGCCTCCCTGAGCACTTTACTGTCTTTGGTTATGCCCGGAGTAAGATGAGTGATGCTGAGCTCAGAGACATGGTTAGCAAGACCCTCACTTGCAGGATTGATAAGAGGGAGAACTGTGGTGAAAAGATGGAACAGTTCCTTCAAAGATGTTTCTACCATTCTGGTCAATATGATACTCCAGAACATTTTGCGGAACTTGACAAAAAATTGAAGCAACACGAGGCTGGGAAGGTTTCTAACCGTCTTTTCTATCTATCGATCCCACCAAATATATTTATAGATGCTGTAAAATGTGCTAGCCTCTCTGCATCCTCTGCTAATGGCTGGACAAGGGTCATCGTTGAGAAACCCTTTGGTCGAGATTCTGAATCCTCTGCTGCTTTAACCAGATCCCTCAAGCAGTACCTGAAGGAGGATCAAATTTTCAGGATAGACCATTATCTAGGGAAAGAACTGGTGGAAAATCTTTCTGTACTGCGCTTCTCCAACCTCATTTTTGAACCCCTGTGGTCAAGGCAGTATATTAGGAATGTTCAGCTGATATTTGCTGAAGACTTTGGCACTGAAGGACGTGGAGGATACTTTGACAATTATGGGATTATTAGAGATATAATGCAAAACCATCTGCTTCAAATACTTGCTCTTTTTGCCATGGAAACTCCTGTCAGTTTGGATGCAGAAGATATCAGAAATGAAAAGGTCAAAGTTTTACGTTCAATGAGGCCTTTACAACTTGATGACGTGGTTGTTGGGCAGTATAAGAGCCACACAAGAGGAGGTGTTAATTACCCAGCCTATACTGATGACAAGACTGTACCAAAAGACAGCCTGACTCCTACTTTTGCTGCAGCTGCCCTTTTCATCGATAATGCACGATGGGACGGGGTTCCGTTTCTAATGAAAGCTGGAAAAGCTTTACATGATAAGAGGGCTGAGATAAGGGTACAATTTAGACACGTGCCTGGCAATTTATATAACCGGAATTTCGGGACAGATCTTGACCAAGCAACAAATGAGCTTGTTATCCGTGTGCAACCCGATGAAGCTATCTATTTGAAGATCAATAACAAGGTCCCTGGTTTGGGGATGAGATTGGACCGCAGTAATCTTAATCTTCTATATGCAGCAAGATACTCGAAGGAGATACCTGATGCGTACGAGAGGCTTCTCCTCGATGCGATTGAAGGAGAAAGAAGACTTTTTATTAGAAGTGACGAACTGGATGCTGCCTGGTCGCTCTTCACACCGGTATTAAAAGAGCTAGAAGAAAAGAAAACAGTTCCAGAGTACTATCCTTACGGAAGTCGGGGTCCTGTTGGGGCCCACTATCTCGCAGCCAGATACAAAGTTCGATGGGGTGATATTAGCACAGATCAATGA

Network for GWHGAAZE023080

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00479.23	G6PD_N	128	306	1.40E-59
PF02781.17	G6PD_C	309	603	3.00E-115

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00036	G6PD, zwf	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Pentose phosphate pathway	map00030
		Glutathione metabolism	map00480

Gene Ontology

GO term	Ontology	Name
GO:0006006	biological_process	glucose metabolic process
GO:0055114	biological_process	oxidation-reduction process
GO:0004345	molecular_function	glucose-6-phosphate dehydrogenase activity
GO:0050661	molecular_function	NADP binding
GO:0016614	molecular_function	oxidoreductase activity, acting on CH-OH group of donors

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	27.337
	SRR3591706	second leaf	57.066
	SRR3591707	mature leaf	44.180
	SRR3591708	Shoot apex	40.526
	SRR3591709	Stem	20.105
	SRR3591710	White floral bud	35.319
	SRR3591711	White flower	55.474
	SRR3591712	Green floral bud	42.688
	SRR3591713	Yellow flower	47.228
SRP173429	SRR8316895	Juvenile bud stage	24.378
	SRR8316896	Juvenile bud stage	36.762
	SRR8316897	Juvenile bud stage	16.445
	SRR8316894	Third green stage	15.991
	SRR8316900	Third green stage	49.889
	SRR8316901	Third green stage	48.902
	SRR8316898	Complete white stage	19.205
	SRR8316899	Complete white stage	46.339
	SRR8316903	Complete white stage	32.662
	SRR8316902	Silver flowering stage	28.147
	SRR8316904	Silver flowering stage	38.644
	SRR8316905	Silver flowering stage	18.820
	SRR8316906	Gold flowering stage	65.323
	SRR8316907	Gold flowering stage	61.272
	SRR8316908	Gold flowering stage	70.622
SRP132670	SRR6706286	Control	50.168
	SRR6706287	Light intensity 50%	53.036
	SRR6706288	Light intensity 20%	57.272
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	22.996
	CNS0095593	Slightly white alabastrum(diploid) 2	20.660
	CNS0095594	Slightly white alabastrum(diploid) 3	23.120
	CNS0095595	Whole white alabastrum(diploid) 2	28.476
	CNS0095596	Whole white alabastrum(diploid) 3	24.056
	CNS0095597	Whole white alabastrum(diploid) 4	25.175
	CNS0095598	Silvery flower (diploied) 1	28.221
	CNS0095599	Silvery flower (diploied) 2	27.741
	CNS0095600	Silvery flower (diploied) 3	81.703
	CNS0095601	Golden flower (diploid) 1	24.269
	CNS0095602	Golden flower (diploid) 2	66.213
	CNS0095603	Golden flower (diploid) 3	63.814
	CNS0095604	Slightly white alabastrum(tetraploid) 1	32.053
	CNS0095605	Slightly white alabastrum(tetraploid) 2	24.967
	CNS0095606	Slightly white alabastrum(tetraploid) 3	42.268
	CNS0095607	Whole white alabastrum(tetraploid) 1	27.364
	CNS0095608	Whole white alabastrum(tetraploid) 2	24.011
	CNS0095609	Whole white alabastrum(tetraploid) 3	44.947
	CNS0095610	Silvery flower (tetraploid) 1	75.037
	CNS0095611	Silvery flower (tetraploid) 2	85.504
	CNS0095612	Silvery flower (tetraploid) 3	43.239
	CNS0095613	Golden flower (tetraploid) 1	38.824
	CNS0095614	Golden flower (tetraploid) 2	67.572
	CNS0095615	Golden flower (tetraploid) 3	56.830
CRA001975	CRR073297	Stem 1	35.321
	CRR073298	Stem 2	32.660
	CRR073299	Stem 3	31.088
	CRR073300	Leaf 1	32.868
	CRR073301	Leaf 2	31.536
	CRR073302	Leaf 3	32.169
	CRR073303	Juvenile bud 1	32.104
	CRR073304	Juvenile bud 2	31.809
	CRR073305	Juvenile bud 3	33.994
	CRR073306	Third green 1	22.083
	CRR073307	Third green 2	16.599
	CRR073308	Third green 3	21.032
	CRR073309	Second white 1	25.916
	CRR073310	Second white 2	27.091
	CRR073311	Second white 3	34.962
	CRR073312	Silver flowering 1	34.204
	CRR073313	Silver flowering 2	28.940
	CRR073314	Silver flowering 3	26.454
	CRR073315	Gold flowering 1	23.227
	CRR073316	Gold flowering 2	33.779
	CRR073317	Gold flowering 3	22.028
	CRR073318	Tawny withering 1	21.142
	CRR073319	Tawny withering 2	17.541
	CRR073320	Tawny withering 3	21.536