Detail information of GWHGAAZE023087


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010249111.11.76571E-48PREDICTED: uncharacterized protein LOC104591786 [Nelumbo nucifera]
Swissprottr|P32295|ARG7_VIGRR6E-12Indole-3-acetic acid-induced protein ARG7
trEMBLtr|F6I1N4|F6I1N4_VITVI7E-48Putative uncharacterized protein {ECO:0000313|EMBL:CCB60851.1}
TAIR10AT5G50760.16E-20SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8322921683229626-
GWHAAZE00000006mRNA8322921683229626-
GWHAAZE00000006exon8322921683229626-
GWHAAZE00000006CDS8322921683229626-
Transcript Sequence

Network for GWHGAAZE023087

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible261021.40E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.517
SRR3591706second leaf1.304
SRR3591707mature leaf8.637
SRR3591708Shoot apex1.525
SRR3591709Stem40.464
SRR3591710White floral bud4.236
SRR3591711White flower26.420
SRR3591712Green floral bud2.639
SRR3591713Yellow flower20.734
SRP173429 SRR8316895Juvenile bud stage 0.246
SRR8316896Juvenile bud stage 1.094
SRR8316897Juvenile bud stage 1.614
SRR8316894Third green stage 0.528
SRR8316900Third green stage 0.622
SRR8316901Third green stage 0.733
SRR8316898Complete white stage 1.148
SRR8316899Complete white stage 4.134
SRR8316903Complete white stage 0.798
SRR8316902Silver flowering stage18.851
SRR8316904Silver flowering stage15.761
SRR8316905Silver flowering stage12.043
SRR8316906Gold flowering stage 48.378
SRR8316907Gold flowering stage 66.621
SRR8316908Gold flowering stage 42.509
SRP132670SRR6706286Control1.096
SRR6706287Light intensity 50%0.799
SRR6706288Light intensity 20%1.682
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.698
CNS0095593Slightly white alabastrum(diploid) 22.233
CNS0095594Slightly white alabastrum(diploid) 30.431
CNS0095595Whole white alabastrum(diploid) 20.989
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 41.075
CNS0095598Silvery flower (diploied) 122.205
CNS0095599Silvery flower (diploied) 216.454
CNS0095600Silvery flower (diploied) 319.984
CNS0095601Golden flower (diploid) 123.205
CNS0095602Golden flower (diploid) 236.927
CNS0095603Golden flower (diploid) 335.526
CNS0095604Slightly white alabastrum(tetraploid) 13.097
CNS0095605Slightly white alabastrum(tetraploid) 23.389
CNS0095606Slightly white alabastrum(tetraploid) 310.076
CNS0095607Whole white alabastrum(tetraploid) 14.086
CNS0095608Whole white alabastrum(tetraploid) 20.325
CNS0095609Whole white alabastrum(tetraploid) 30.461
CNS0095610Silvery flower (tetraploid) 146.989
CNS0095611Silvery flower (tetraploid) 224.337
CNS0095612Silvery flower (tetraploid) 316.087
CNS0095613Golden flower (tetraploid) 146.352
CNS0095614Golden flower (tetraploid) 273.664
CNS0095615Golden flower (tetraploid) 39.062
CRA001975CRR073297Stem 10.378
CRR073298Stem 20.879
CRR073299Stem 31.218
CRR073300Leaf 10.309
CRR073301Leaf 21.938
CRR073302Leaf 30.873
CRR073303Juvenile bud 11.310
CRR073304Juvenile bud 20.589
CRR073305Juvenile bud 30.683
CRR073306Third green 167.751
CRR073307Third green 271.372
CRR073308Third green 369.915
CRR073309Second white 181.430
CRR073310Second white 283.558
CRR073311Second white 352.319
CRR073312Silver flowering 156.547
CRR073313Silver flowering 235.501
CRR073314Silver flowering 331.635
CRR073315Gold flowering 12.036
CRR073316Gold flowering 21.991
CRR073317Gold flowering 30.266
CRR073318Tawny withering 129.068
CRR073319Tawny withering 220.973
CRR073320Tawny withering 330.893