Detail information of GWHGAAZE023099


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP23290.10hypothetical protein JCGZ_23123 [Jatropha curcas]
COGYP_007020176.11E-161transketolase
Swissprottr|Q6Z1G7|ODPB1_ORYSJ0Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial (Precursor)
trEMBLtr|A0A067JTH6|A0A067JTH6_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP23290.1}
TAIR10AT5G50850.10Transketolase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene8347719383484211-
GWHAAZE00000006mRNA8347719383484211-
GWHAAZE00000006exon8348416183484211-
GWHAAZE00000006exon8348396983484043-
GWHAAZE00000006exon8348345483483534-
GWHAAZE00000006exon8348333083483356-
GWHAAZE00000006exon8348315383483215-
GWHAAZE00000006exon8348290683482992-
GWHAAZE00000006exon8348104083481165-
GWHAAZE00000006exon8347973283479865-
GWHAAZE00000006exon8347956483479636-
GWHAAZE00000006exon8347937283479437-
GWHAAZE00000006exon8347792983477967-
GWHAAZE00000006exon8347766583477789-
GWHAAZE00000006exon8347743783477551-
GWHAAZE00000006exon8347719383477261-
GWHAAZE00000006CDS8348416183484211-
GWHAAZE00000006CDS8348396983484043-
GWHAAZE00000006CDS8348345483483534-
GWHAAZE00000006CDS8348333083483356-
GWHAAZE00000006CDS8348315383483215-
GWHAAZE00000006CDS8348290683482992-
GWHAAZE00000006CDS8348104083481165-
GWHAAZE00000006CDS8347973283479865-
GWHAAZE00000006CDS8347956483479636-
GWHAAZE00000006CDS8347937283479437-
GWHAAZE00000006CDS8347792983477967-
GWHAAZE00000006CDS8347766583477789-
GWHAAZE00000006CDS8347743783477551-
GWHAAZE00000006CDS8347719383477261-
Transcript Sequence

Network for GWHGAAZE023099

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02779.25Transket_pyr422172.10E-45
PF02780.21Transketolase_C2363588.30E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00162PDHB, pdhB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cyclemap00020
Pyruvate metabolismmap00620
HIF-1 signaling pathwaymap04066
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf234.416
SRR3591706second leaf99.371
SRR3591707mature leaf72.904
SRR3591708Shoot apex114.702
SRR3591709Stem177.922
SRR3591710White floral bud296.579
SRR3591711White flower305.027
SRR3591712Green floral bud250.796
SRR3591713Yellow flower292.443
SRP173429 SRR8316895Juvenile bud stage 125.820
SRR8316896Juvenile bud stage 197.380
SRR8316897Juvenile bud stage 104.517
SRR8316894Third green stage 85.783
SRR8316900Third green stage 335.906
SRR8316901Third green stage 296.486
SRR8316898Complete white stage 234.866
SRR8316899Complete white stage 333.708
SRR8316903Complete white stage 309.191
SRR8316902Silver flowering stage251.796
SRR8316904Silver flowering stage318.563
SRR8316905Silver flowering stage169.885
SRR8316906Gold flowering stage 587.154
SRR8316907Gold flowering stage 628.247
SRR8316908Gold flowering stage 676.445
SRP132670SRR6706286Control206.924
SRR6706287Light intensity 50%217.909
SRR6706288Light intensity 20%239.069
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1150.956
CNS0095593Slightly white alabastrum(diploid) 2161.136
CNS0095594Slightly white alabastrum(diploid) 3147.958
CNS0095595Whole white alabastrum(diploid) 2172.535
CNS0095596Whole white alabastrum(diploid) 3196.455
CNS0095597Whole white alabastrum(diploid) 4165.289
CNS0095598Silvery flower (diploied) 1112.796
CNS0095599Silvery flower (diploied) 2128.626
CNS0095600Silvery flower (diploied) 3313.544
CNS0095601Golden flower (diploid) 1100.731
CNS0095602Golden flower (diploid) 2220.710
CNS0095603Golden flower (diploid) 3214.024
CNS0095604Slightly white alabastrum(tetraploid) 1200.621
CNS0095605Slightly white alabastrum(tetraploid) 2168.270
CNS0095606Slightly white alabastrum(tetraploid) 3216.811
CNS0095607Whole white alabastrum(tetraploid) 1156.892
CNS0095608Whole white alabastrum(tetraploid) 2176.782
CNS0095609Whole white alabastrum(tetraploid) 3265.062
CNS0095610Silvery flower (tetraploid) 1343.425
CNS0095611Silvery flower (tetraploid) 2281.981
CNS0095612Silvery flower (tetraploid) 3456.002
CNS0095613Golden flower (tetraploid) 1202.863
CNS0095614Golden flower (tetraploid) 2280.321
CNS0095615Golden flower (tetraploid) 3243.613
CRA001975CRR073297Stem 1163.590
CRR073298Stem 2142.818
CRR073299Stem 3140.961
CRR073300Leaf 1214.371
CRR073301Leaf 2210.071
CRR073302Leaf 3248.197
CRR073303Juvenile bud 1283.925
CRR073304Juvenile bud 2279.772
CRR073305Juvenile bud 3238.287
CRR073306Third green 1418.616
CRR073307Third green 2339.102
CRR073308Third green 3334.633
CRR073309Second white 1488.139
CRR073310Second white 2395.531
CRR073311Second white 3365.237
CRR073312Silver flowering 1335.723
CRR073313Silver flowering 2327.030
CRR073314Silver flowering 3322.571
CRR073315Gold flowering 159.868
CRR073316Gold flowering 268.967
CRR073317Gold flowering 346.411
CRR073318Tawny withering 1132.363
CRR073319Tawny withering 2122.323
CRR073320Tawny withering 3128.996