Detail information of GWHGAAZE023129


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283468.16.76505E-61PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
trEMBLtr|D7SXA8|D7SXA8_VITVI3E-61Putative uncharacterized protein {ECO:0000313|EMBL:CBI22205.3}
TAIR10AT5G15240.11E-39Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7771180835-
GWHAAZE00000007mRNA7771180835-
GWHAAZE00000007exon7771178184-
GWHAAZE00000007exon7864178743-
GWHAAZE00000007exon7912979221-
GWHAAZE00000007exon8064880835-
GWHAAZE00000007CDS8064880835-
GWHAAZE00000007CDS7912979221-
GWHAAZE00000007CDS7864178743-
GWHAAZE00000007CDS7771178184-
Transcript Sequence

Network for GWHGAAZE023129

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans952768.50E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.160
SRR3591706second leaf1.772
SRR3591707mature leaf3.169
SRR3591708Shoot apex0.150
SRR3591709Stem0.000
SRR3591710White floral bud0.263
SRR3591711White flower0.262
SRR3591712Green floral bud0.405
SRR3591713Yellow flower0.107
SRP173429 SRR8316895Juvenile bud stage 0.100
SRR8316896Juvenile bud stage 0.233
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.051
SRR8316901Third green stage 0.035
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.040
SRR8316903Complete white stage 0.093
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.033
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.084
SRP132670SRR6706286Control0.030
SRR6706287Light intensity 50%0.013
SRR6706288Light intensity 20%0.101
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.064
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.074
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.031
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.084
CNS0095603Golden flower (diploid) 30.047
CNS0095604Slightly white alabastrum(tetraploid) 10.040
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.029
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.038
CNS0095611Silvery flower (tetraploid) 20.005
CNS0095612Silvery flower (tetraploid) 30.153
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.104
CNS0095615Golden flower (tetraploid) 30.064
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.137
CRR073299Stem 30.000
CRR073300Leaf 10.388
CRR073301Leaf 20.208
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.193
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.008
CRR073307Third green 20.000
CRR073308Third green 30.053
CRR073309Second white 10.111
CRR073310Second white 20.038
CRR073311Second white 30.008
CRR073312Silver flowering 10.041
CRR073313Silver flowering 20.016
CRR073314Silver flowering 30.111
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.093
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.016
CRR073320Tawny withering 30.203