Detail information of GWHGAAZE023219


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002522369.18.56501E-20conserved hypothetical protein [Ricinus communis]
trEMBLtr|B9S8Q0|B9S8Q0_RICCO3E-20Putative uncharacterized protein {ECO:0000313|EMBL:EEF40053.1}
TAIR10AT4G37030.10.000009Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene18777721879858-
GWHAAZE00000007mRNA18777721879858-
GWHAAZE00000007exon18797571879858-
GWHAAZE00000007exon18785821878687-
GWHAAZE00000007exon18782401878465-
GWHAAZE00000007exon18777721877874-
GWHAAZE00000007CDS18797571879858-
GWHAAZE00000007CDS18785821878687-
GWHAAZE00000007CDS18782401878465-
GWHAAZE00000007CDS18777721877874-
Transcript Sequence

Network for GWHGAAZE023219

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0179


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.909
SRR3591706second leaf5.265
SRR3591707mature leaf3.823
SRR3591708Shoot apex2.279
SRR3591709Stem1.829
SRR3591710White floral bud5.079
SRR3591711White flower9.735
SRR3591712Green floral bud1.865
SRR3591713Yellow flower7.621
SRP173429 SRR8316895Juvenile bud stage 0.871
SRR8316896Juvenile bud stage 0.481
SRR8316897Juvenile bud stage 1.367
SRR8316894Third green stage 0.064
SRR8316900Third green stage 0.776
SRR8316901Third green stage 0.354
SRR8316898Complete white stage 0.040
SRR8316899Complete white stage 0.241
SRR8316903Complete white stage 0.279
SRR8316902Silver flowering stage0.552
SRR8316904Silver flowering stage1.192
SRR8316905Silver flowering stage0.525
SRR8316906Gold flowering stage 0.999
SRR8316907Gold flowering stage 0.109
SRR8316908Gold flowering stage 1.418
SRP132670SRR6706286Control0.092
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.367
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.541
CNS0095593Slightly white alabastrum(diploid) 20.296
CNS0095594Slightly white alabastrum(diploid) 30.104
CNS0095595Whole white alabastrum(diploid) 20.160
CNS0095596Whole white alabastrum(diploid) 30.061
CNS0095597Whole white alabastrum(diploid) 40.121
CNS0095598Silvery flower (diploied) 10.627
CNS0095599Silvery flower (diploied) 20.177
CNS0095600Silvery flower (diploied) 30.446
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.296
CNS0095603Golden flower (diploid) 30.279
CNS0095604Slightly white alabastrum(tetraploid) 10.198
CNS0095605Slightly white alabastrum(tetraploid) 20.037
CNS0095606Slightly white alabastrum(tetraploid) 30.164
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.057
CNS0095609Whole white alabastrum(tetraploid) 30.099
CNS0095610Silvery flower (tetraploid) 10.430
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.572
CNS0095613Golden flower (tetraploid) 10.247
CNS0095614Golden flower (tetraploid) 20.549
CNS0095615Golden flower (tetraploid) 30.238
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.119
CRR073299Stem 30.174
CRR073300Leaf 10.000
CRR073301Leaf 20.142
CRR073302Leaf 30.048
CRR073303Juvenile bud 10.414
CRR073304Juvenile bud 20.182
CRR073305Juvenile bud 30.065
CRR073306Third green 10.847
CRR073307Third green 20.000
CRR073308Third green 30.457
CRR073309Second white 10.129
CRR073310Second white 20.564
CRR073311Second white 30.000
CRR073312Silver flowering 10.405
CRR073313Silver flowering 20.017
CRR073314Silver flowering 30.436
CRR073315Gold flowering 10.029
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.096
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.204
CRR073320Tawny withering 30.008