Detail information of GWHGAAZE023309


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009774046.12.57602E-91PREDICTED: LOB domain-containing protein 36-like [Nicotiana sylvestris]
Swissprottr|Q9FKZ3|LBD36_ARATH3E-80LOB domain-containing protein 36
trEMBLtr|K4B6V0|K4B6V0_SOLLC2E-88Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc02g065150.1.1}
TAIR10AT5G66870.11E-60ASYMMETRIC LEAVES 2-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene49102434911067-
GWHAAZE00000007mRNA49102434911067-
GWHAAZE00000007exon49102434911067-
GWHAAZE00000007CDS49102434911067-
Transcript Sequence

Network for GWHGAAZE023309

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB71038.50E-40
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.259
SRR3591707mature leaf0.106
SRR3591708Shoot apex1.339
SRR3591709Stem0.000
SRR3591710White floral bud0.574
SRR3591711White flower0.018
SRR3591712Green floral bud2.272
SRR3591713Yellow flower0.274
SRP173429 SRR8316895Juvenile bud stage 1.256
SRR8316896Juvenile bud stage 2.080
SRR8316897Juvenile bud stage 1.997
SRR8316894Third green stage 0.325
SRR8316900Third green stage 2.491
SRR8316901Third green stage 2.940
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.135
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control2.057
SRR6706287Light intensity 50%1.772
SRR6706288Light intensity 20%1.010
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.011
CNS0095593Slightly white alabastrum(diploid) 20.625
CNS0095594Slightly white alabastrum(diploid) 33.842
CNS0095595Whole white alabastrum(diploid) 21.753
CNS0095596Whole white alabastrum(diploid) 33.156
CNS0095597Whole white alabastrum(diploid) 42.129
CNS0095598Silvery flower (diploied) 10.493
CNS0095599Silvery flower (diploied) 21.149
CNS0095600Silvery flower (diploied) 30.012
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.264
CNS0095603Golden flower (diploid) 30.360
CNS0095604Slightly white alabastrum(tetraploid) 110.785
CNS0095605Slightly white alabastrum(tetraploid) 29.538
CNS0095606Slightly white alabastrum(tetraploid) 30.604
CNS0095607Whole white alabastrum(tetraploid) 19.981
CNS0095608Whole white alabastrum(tetraploid) 212.937
CNS0095609Whole white alabastrum(tetraploid) 310.325
CNS0095610Silvery flower (tetraploid) 11.044
CNS0095611Silvery flower (tetraploid) 21.391
CNS0095612Silvery flower (tetraploid) 31.177
CNS0095613Golden flower (tetraploid) 11.458
CNS0095614Golden flower (tetraploid) 21.796
CNS0095615Golden flower (tetraploid) 31.334
CRA001975CRR073297Stem 11.913
CRR073298Stem 21.083
CRR073299Stem 31.661
CRR073300Leaf 11.335
CRR073301Leaf 21.934
CRR073302Leaf 31.312
CRR073303Juvenile bud 10.289
CRR073304Juvenile bud 20.033
CRR073305Juvenile bud 30.000
CRR073306Third green 10.080
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.009
CRR073310Second white 20.097
CRR073311Second white 30.003
CRR073312Silver flowering 10.021
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.051
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.100