Detail information of GWHGAAZE023440


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010652748.10PREDICTED: uncharacterized protein LOC100247452 isoform X2 [Vitis vinifera]
COGYP_007065907.10.0000001serine/threonine protein kinase with WD40 repeats
trEMBLtr|F6HSV7|F6HSV7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57767.1}
TAIR10AT4G34280.10transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene86531428658756-
GWHAAZE00000007mRNA86531428658756-
GWHAAZE00000007exon86587258658756-
GWHAAZE00000007exon86572068657272-
GWHAAZE00000007exon86568468657099-
GWHAAZE00000007exon86561078656572-
GWHAAZE00000007exon86551968655807-
GWHAAZE00000007exon86543498654789-
GWHAAZE00000007exon86537048653898-
GWHAAZE00000007exon86535358653591-
GWHAAZE00000007exon86533108653372-
GWHAAZE00000007exon86531428653222-
GWHAAZE00000007CDS86587258658756-
GWHAAZE00000007CDS86572068657272-
GWHAAZE00000007CDS86568468657099-
GWHAAZE00000007CDS86561078656572-
GWHAAZE00000007CDS86551968655807-
GWHAAZE00000007CDS86543498654789-
GWHAAZE00000007CDS86537048653898-
GWHAAZE00000007CDS86535358653591-
GWHAAZE00000007CDS86533108653372-
GWHAAZE00000007CDS86531428653222-
Transcript Sequence

Network for GWHGAAZE023440

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.464
SRR3591706second leaf13.621
SRR3591707mature leaf22.964
SRR3591708Shoot apex35.202
SRR3591709Stem11.296
SRR3591710White floral bud17.389
SRR3591711White flower11.713
SRR3591712Green floral bud5.026
SRR3591713Yellow flower6.726
SRP173429 SRR8316895Juvenile bud stage 12.249
SRR8316896Juvenile bud stage 12.141
SRR8316897Juvenile bud stage 6.996
SRR8316894Third green stage 3.423
SRR8316900Third green stage 7.813
SRR8316901Third green stage 9.524
SRR8316898Complete white stage 5.478
SRR8316899Complete white stage 23.328
SRR8316903Complete white stage 9.827
SRR8316902Silver flowering stage2.184
SRR8316904Silver flowering stage3.701
SRR8316905Silver flowering stage1.200
SRR8316906Gold flowering stage 5.719
SRR8316907Gold flowering stage 3.983
SRR8316908Gold flowering stage 5.121
SRP132670SRR6706286Control7.971
SRR6706287Light intensity 50%7.257
SRR6706288Light intensity 20%5.949
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.371
CNS0095593Slightly white alabastrum(diploid) 26.145
CNS0095594Slightly white alabastrum(diploid) 35.801
CNS0095595Whole white alabastrum(diploid) 23.174
CNS0095596Whole white alabastrum(diploid) 32.482
CNS0095597Whole white alabastrum(diploid) 44.294
CNS0095598Silvery flower (diploied) 124.088
CNS0095599Silvery flower (diploied) 219.680
CNS0095600Silvery flower (diploied) 312.703
CNS0095601Golden flower (diploid) 135.994
CNS0095602Golden flower (diploid) 225.423
CNS0095603Golden flower (diploid) 323.679
CNS0095604Slightly white alabastrum(tetraploid) 13.209
CNS0095605Slightly white alabastrum(tetraploid) 23.602
CNS0095606Slightly white alabastrum(tetraploid) 312.015
CNS0095607Whole white alabastrum(tetraploid) 13.386
CNS0095608Whole white alabastrum(tetraploid) 21.559
CNS0095609Whole white alabastrum(tetraploid) 34.415
CNS0095610Silvery flower (tetraploid) 13.905
CNS0095611Silvery flower (tetraploid) 212.988
CNS0095612Silvery flower (tetraploid) 310.823
CNS0095613Golden flower (tetraploid) 12.274
CNS0095614Golden flower (tetraploid) 23.525
CNS0095615Golden flower (tetraploid) 34.282
CRA001975CRR073297Stem 141.538
CRR073298Stem 234.095
CRR073299Stem 331.604
CRR073300Leaf 118.935
CRR073301Leaf 217.790
CRR073302Leaf 314.153
CRR073303Juvenile bud 17.844
CRR073304Juvenile bud 210.849
CRR073305Juvenile bud 313.027
CRR073306Third green 10.886
CRR073307Third green 20.606
CRR073308Third green 31.220
CRR073309Second white 10.638
CRR073310Second white 20.194
CRR073311Second white 30.091
CRR073312Silver flowering 10.341
CRR073313Silver flowering 20.880
CRR073314Silver flowering 30.088
CRR073315Gold flowering 121.852
CRR073316Gold flowering 238.389
CRR073317Gold flowering 332.938
CRR073318Tawny withering 117.852
CRR073319Tawny withering 225.059
CRR073320Tawny withering 319.501