Detail information of GWHGAAZE023530


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002275168.10PREDICTED: 26S proteasome non-ATPase regulatory subunit 13 homolog A [Vitis vinifera]
Swissprottr|Q8RWF0|PS13A_ARATH026S proteasome non-ATPase regulatory subunit 13 homolog A
trEMBLtr|F6HT17|F6HT17_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57827.1}
TAIR10AT5G45620.10Proteasome component (PCI) domain protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene1235702812375137-
GWHAAZE00000007mRNA1235702812375137-
GWHAAZE00000007exon1235702812357547-
GWHAAZE00000007exon1235894112359040-
GWHAAZE00000007exon1235937912359575-
GWHAAZE00000007exon1236358612363666-
GWHAAZE00000007exon1236541212365858-
GWHAAZE00000007exon1237498812375137-
GWHAAZE00000007CDS1237498812375137-
GWHAAZE00000007CDS1236541212365858-
GWHAAZE00000007CDS1236358612363666-
GWHAAZE00000007CDS1235937912359575-
GWHAAZE00000007CDS1235894112359040-
GWHAAZE00000007CDS1235736212357547-
GWHAAZE00000007three_prime_UTR1235702812357361-
Transcript Sequence

Network for GWHGAAZE023530

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01399.28PCI2383433.20E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03039PSMD13, RPN9 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.687
SRR3591706second leaf23.927
SRR3591707mature leaf13.333
SRR3591708Shoot apex40.855
SRR3591709Stem30.615
SRR3591710White floral bud23.644
SRR3591711White flower39.606
SRR3591712Green floral bud36.223
SRR3591713Yellow flower26.205
SRP173429 SRR8316895Juvenile bud stage 25.145
SRR8316896Juvenile bud stage 30.941
SRR8316897Juvenile bud stage 17.183
SRR8316894Third green stage 12.137
SRR8316900Third green stage 33.432
SRR8316901Third green stage 32.662
SRR8316898Complete white stage 12.552
SRR8316899Complete white stage 35.313
SRR8316903Complete white stage 15.450
SRR8316902Silver flowering stage15.638
SRR8316904Silver flowering stage17.390
SRR8316905Silver flowering stage7.214
SRR8316906Gold flowering stage 23.054
SRR8316907Gold flowering stage 25.852
SRR8316908Gold flowering stage 23.373
SRP132670SRR6706286Control22.414
SRR6706287Light intensity 50%22.778
SRR6706288Light intensity 20%24.144
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.373
CNS0095593Slightly white alabastrum(diploid) 234.672
CNS0095594Slightly white alabastrum(diploid) 334.913
CNS0095595Whole white alabastrum(diploid) 228.611
CNS0095596Whole white alabastrum(diploid) 329.697
CNS0095597Whole white alabastrum(diploid) 422.479
CNS0095598Silvery flower (diploied) 126.312
CNS0095599Silvery flower (diploied) 221.729
CNS0095600Silvery flower (diploied) 328.447
CNS0095601Golden flower (diploid) 119.640
CNS0095602Golden flower (diploid) 226.243
CNS0095603Golden flower (diploid) 324.646
CNS0095604Slightly white alabastrum(tetraploid) 133.703
CNS0095605Slightly white alabastrum(tetraploid) 230.732
CNS0095606Slightly white alabastrum(tetraploid) 340.457
CNS0095607Whole white alabastrum(tetraploid) 120.123
CNS0095608Whole white alabastrum(tetraploid) 220.737
CNS0095609Whole white alabastrum(tetraploid) 332.866
CNS0095610Silvery flower (tetraploid) 127.549
CNS0095611Silvery flower (tetraploid) 226.062
CNS0095612Silvery flower (tetraploid) 321.660
CNS0095613Golden flower (tetraploid) 115.244
CNS0095614Golden flower (tetraploid) 222.384
CNS0095615Golden flower (tetraploid) 316.389
CRA001975CRR073297Stem 117.733
CRR073298Stem 217.808
CRR073299Stem 319.538
CRR073300Leaf 115.129
CRR073301Leaf 214.656
CRR073302Leaf 318.252
CRR073303Juvenile bud 118.200
CRR073304Juvenile bud 214.880
CRR073305Juvenile bud 314.807
CRR073306Third green 19.328
CRR073307Third green 27.074
CRR073308Third green 38.075
CRR073309Second white 115.023
CRR073310Second white 211.341
CRR073311Second white 36.412
CRR073312Silver flowering 15.869
CRR073313Silver flowering 29.289
CRR073314Silver flowering 36.937
CRR073315Gold flowering 110.859
CRR073316Gold flowering 213.032
CRR073317Gold flowering 310.810
CRR073318Tawny withering 122.054
CRR073319Tawny withering 217.763
CRR073320Tawny withering 323.786