Detail information of GWHGAAZE023599


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011018437.14.8911E-158PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2-like [Populus euphratica]
Swissprottr|E6Y2X0|PILR2_LINUS4E-149Bifunctional pinoresinol-lariciresinol reductase 2
trEMBLtr|F6HQR3|F6HQR3_VITVI7E-158Putative uncharacterized protein {ECO:0000313|EMBL:CCB57144.1}
TAIR10AT1G32100.13E-84pinoresinol reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene1630929216312133-
GWHAAZE00000007mRNA1630929216312133-
GWHAAZE00000007exon1630929216309455-
GWHAAZE00000007exon1630977316309976-
GWHAAZE00000007exon1631156016311785-
GWHAAZE00000007exon1631194816312133-
GWHAAZE00000007CDS1631194816312133-
GWHAAZE00000007CDS1631156016311785-
GWHAAZE00000007CDS1630977316309976-
GWHAAZE00000007CDS1630929216309455-
Transcript Sequence

Network for GWHGAAZE023599

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05368.14NmrA41891.40E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K21568PLR Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of various secondary metabolites - part 2map00998

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf146.977
SRR3591706second leaf4.967
SRR3591707mature leaf1.114
SRR3591708Shoot apex4.916
SRR3591709Stem315.195
SRR3591710White floral bud1.793
SRR3591711White flower1.628
SRR3591712Green floral bud5.166
SRR3591713Yellow flower4.628
SRP173429 SRR8316895Juvenile bud stage 39.239
SRR8316896Juvenile bud stage 18.602
SRR8316897Juvenile bud stage 4.335
SRR8316894Third green stage 3.159
SRR8316900Third green stage 11.810
SRR8316901Third green stage 11.787
SRR8316898Complete white stage 0.080
SRR8316899Complete white stage 2.248
SRR8316903Complete white stage 0.826
SRR8316902Silver flowering stage0.027
SRR8316904Silver flowering stage0.307
SRR8316905Silver flowering stage0.138
SRR8316906Gold flowering stage 0.236
SRR8316907Gold flowering stage 0.149
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control5.213
SRR6706287Light intensity 50%3.600
SRR6706288Light intensity 20%5.702
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.332
CNS0095593Slightly white alabastrum(diploid) 23.396
CNS0095594Slightly white alabastrum(diploid) 38.871
CNS0095595Whole white alabastrum(diploid) 22.545
CNS0095596Whole white alabastrum(diploid) 33.377
CNS0095597Whole white alabastrum(diploid) 41.338
CNS0095598Silvery flower (diploied) 10.631
CNS0095599Silvery flower (diploied) 20.418
CNS0095600Silvery flower (diploied) 30.588
CNS0095601Golden flower (diploid) 11.316
CNS0095602Golden flower (diploid) 20.052
CNS0095603Golden flower (diploid) 30.661
CNS0095604Slightly white alabastrum(tetraploid) 10.335
CNS0095605Slightly white alabastrum(tetraploid) 21.256
CNS0095606Slightly white alabastrum(tetraploid) 324.732
CNS0095607Whole white alabastrum(tetraploid) 10.160
CNS0095608Whole white alabastrum(tetraploid) 20.016
CNS0095609Whole white alabastrum(tetraploid) 313.671
CNS0095610Silvery flower (tetraploid) 10.109
CNS0095611Silvery flower (tetraploid) 20.351
CNS0095612Silvery flower (tetraploid) 30.512
CNS0095613Golden flower (tetraploid) 10.350
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.089
CRA001975CRR073297Stem 174.144
CRR073298Stem 232.629
CRR073299Stem 312.869
CRR073300Leaf 14.685
CRR073301Leaf 23.905
CRR073302Leaf 36.241
CRR073303Juvenile bud 10.433
CRR073304Juvenile bud 20.474
CRR073305Juvenile bud 31.256
CRR073306Third green 10.065
CRR073307Third green 20.703
CRR073308Third green 30.066
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.119
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.153
CRR073317Gold flowering 30.000
CRR073318Tawny withering 117.291
CRR073319Tawny withering 214.705
CRR073320Tawny withering 334.779