Gene detail

Detail information of GWHGAAZE023610

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KCW72720.1	3.9193E-134	hypothetical protein EUGRSUZ_E01169 [Eucalyptus grandis]
trEMBL	tr\|A0A059C445\|A0A059C445_EUCGR	1E-134	Uncharacterized protein {ECO:0000313\|EMBL:KCW72720.1}
TAIR10	AT4G19420.1	4E-101	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	16827211	16829906	+
GWHAAZE00000007	mRNA	16827211	16829906	+
GWHAAZE00000007	exon	16827211	16827337	+
GWHAAZE00000007	exon	16827452	16827534	+
GWHAAZE00000007	exon	16827617	16827746	+
GWHAAZE00000007	exon	16827857	16827939	+
GWHAAZE00000007	exon	16828057	16828143	+
GWHAAZE00000007	exon	16828243	16828367	+
GWHAAZE00000007	exon	16828487	16828550	+
GWHAAZE00000007	exon	16828667	16828720	+
GWHAAZE00000007	exon	16828803	16828880	+
GWHAAZE00000007	exon	16829003	16829111	+
GWHAAZE00000007	exon	16829555	16829700	+
GWHAAZE00000007	exon	16829805	16829906	+
GWHAAZE00000007	CDS	16827211	16827337	+
GWHAAZE00000007	CDS	16827452	16827534	+
GWHAAZE00000007	CDS	16827617	16827746	+
GWHAAZE00000007	CDS	16827857	16827939	+
GWHAAZE00000007	CDS	16828057	16828143	+
GWHAAZE00000007	CDS	16828243	16828367	+
GWHAAZE00000007	CDS	16828487	16828550	+
GWHAAZE00000007	CDS	16828667	16828720	+
GWHAAZE00000007	CDS	16828803	16828880	+
GWHAAZE00000007	CDS	16829003	16829111	+
GWHAAZE00000007	CDS	16829555	16829700	+
GWHAAZE00000007	CDS	16829805	16829906	+

Transcript Sequence
>GWHTAAZE023640 ATGGTGAATGCCACTTTGTCTTCCTACTTGGTGGTGGTGGTTTCAGTTGTCTTGATCCAAGGAAATATTGCTTCCCCTGTGACTGTGGATCTCACACGCGTGTACTCAGCTGTTGCCAAAGGAGCAGTTTGTCTTGACGGAAGTCCGCCAGCATACCAGTTTGACAAGGGAAATAGAGAAGGAATCAACAATTGGTTGATTCATTTAGAGGGTGGCGGATGGTGCGACTCACTTGAAAGTTGCTCAAAACGTGGAAAAGACCCAAATCTAGGGTCTTCCAATAAAATGGTTAGAAGAGGTTTCTATGGGATTTTGAGCAACTCAAAGGAAGAAAATCCACACTTTTATAACTGGAACAGAATTCTAGTTAGATATTGTGATGGGTTGTCGTTTACTGGTGATGTTGATGAGAAAGTTTTTCAAGGGTCCAAATTTTATATGAGAGGAGCAAGGGTCTTTGATGCAATCATGGAAGACCTTTTAGAGAAAGGAATGAAGGATGCCTCAAATGCTCTTCTCAACGGATGCTCAGCTGGTGGTTTGGCAACCATATTGCATTGTGATAAATTCCAATCTTTAATAGCCACCACAGCTAGAGTAAAATGCTTTTCCGATGGTGGTTATTTTCTCCATGCGAAAGATTTCTATGGAGAATATCACTTCCTATATAAGAAATTTGCGAAAGTTGTTGCCGTACACGGCTCAGCAAAGAATTTGCCATCATCTTGTACTTCAAAGATTAGACCGAGTTTGTGCTTTTATCCGCAAAACGTTGTTAAACATATTCAAACTCGGCTATTTATTTTGAATTCAGTCTTTGACACATATCAGCTCAAGAACATTTTCGCACTAACTTATCTACCTAAAGTTGGCCACTCTTGGATAAAATGCTCAAATAACACAAAGTACTGCTCAGCCAGCCAAATCAAGAGATTGGAAGGTTTAAAGTCAGAATTTGTGAACACAGTTTTGACTAGGTTGGGTAACCCTTCCTCTAGAGGCTGGTTCATCAACTATTGTTATGCTCATTGCCAATCTTTGTTTGGACCCAGTTGGCTTGGACCTAATGTAACACTAAATCACATGACAATTTCTGAGGCAGTTGGGGATTGGTTTTACGAAAGACGGGTGGTACGTCTGGTAGATCAGAAACATAACTTGCCACATTCGTGCGTGCGTGAAAAATGA

Network for GWHGAAZE023610

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	26	376	1.10E-126

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.061
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	8.145
	SRR3591711	White flower	4.083
	SRR3591712	Green floral bud	5.174
	SRR3591713	Yellow flower	3.106
SRP173429	SRR8316895	Juvenile bud stage	1.228
	SRR8316896	Juvenile bud stage	2.765
	SRR8316897	Juvenile bud stage	4.000
	SRR8316894	Third green stage	2.390
	SRR8316900	Third green stage	10.403
	SRR8316901	Third green stage	7.573
	SRR8316898	Complete white stage	0.036
	SRR8316899	Complete white stage	1.454
	SRR8316903	Complete white stage	0.515
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.492
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.098
SRP132670	SRR6706286	Control	4.617
	SRR6706287	Light intensity 50%	4.273
	SRR6706288	Light intensity 20%	5.083
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.819
	CNS0095593	Slightly white alabastrum(diploid) 2	2.264
	CNS0095594	Slightly white alabastrum(diploid) 3	0.713
	CNS0095595	Whole white alabastrum(diploid) 2	1.523
	CNS0095596	Whole white alabastrum(diploid) 3	2.113
	CNS0095597	Whole white alabastrum(diploid) 4	1.204
	CNS0095598	Silvery flower (diploied) 1	2.270
	CNS0095599	Silvery flower (diploied) 2	1.137
	CNS0095600	Silvery flower (diploied) 3	0.242
	CNS0095601	Golden flower (diploid) 1	0.320
	CNS0095602	Golden flower (diploid) 2	0.180
	CNS0095603	Golden flower (diploid) 3	0.176
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.216
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.993
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.331
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.037
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.426
	CNS0095609	Whole white alabastrum(tetraploid) 3	18.648
	CNS0095610	Silvery flower (tetraploid) 1	12.053
	CNS0095611	Silvery flower (tetraploid) 2	3.335
	CNS0095612	Silvery flower (tetraploid) 3	4.373
	CNS0095613	Golden flower (tetraploid) 1	0.156
	CNS0095614	Golden flower (tetraploid) 2	5.946
	CNS0095615	Golden flower (tetraploid) 3	2.860
CRA001975	CRR073297	Stem 1	0.200
	CRR073298	Stem 2	0.396
	CRR073299	Stem 3	0.165
	CRR073300	Leaf 1	2.400
	CRR073301	Leaf 2	0.283
	CRR073302	Leaf 3	0.347
	CRR073303	Juvenile bud 1	0.529
	CRR073304	Juvenile bud 2	0.894
	CRR073305	Juvenile bud 3	0.315
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.281
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000