Gene detail

Detail information of GWHGAAZE023617

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011028476.1	7.206E-127	PREDICTED: protein notum homolog [Populus euphratica]
trEMBL	tr\|B9N0N1\|B9N0N1_POPTR	4E-127	Pectinacetylesterase family protein {ECO:0000313\|EMBL:ERP62930.1}
TAIR10	AT4G19420.1	1E-100	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	17499641	17502540	+
GWHAAZE00000007	mRNA	17499641	17502540	+
GWHAAZE00000007	exon	17499641	17499719	+
GWHAAZE00000007	exon	17499817	17499899	+
GWHAAZE00000007	exon	17499987	17500119	+
GWHAAZE00000007	exon	17500210	17500289	+
GWHAAZE00000007	exon	17500421	17500507	+
GWHAAZE00000007	exon	17500635	17500759	+
GWHAAZE00000007	exon	17500875	17500938	+
GWHAAZE00000007	exon	17501067	17501120	+
GWHAAZE00000007	exon	17501205	17501282	+
GWHAAZE00000007	exon	17501395	17501503	+
GWHAAZE00000007	exon	17502046	17502205	+
GWHAAZE00000007	exon	17502289	17502540	+
GWHAAZE00000007	CDS	17499641	17499719	+
GWHAAZE00000007	CDS	17499817	17499899	+
GWHAAZE00000007	CDS	17499987	17500119	+
GWHAAZE00000007	CDS	17500210	17500289	+
GWHAAZE00000007	CDS	17500421	17500507	+
GWHAAZE00000007	CDS	17500635	17500759	+
GWHAAZE00000007	CDS	17500875	17500938	+
GWHAAZE00000007	CDS	17501067	17501120	+
GWHAAZE00000007	CDS	17501205	17501282	+
GWHAAZE00000007	CDS	17501395	17501503	+
GWHAAZE00000007	CDS	17502046	17502205	+
GWHAAZE00000007	CDS	17502289	17502421	+
GWHAAZE00000007	three_prime_UTR	17502422	17502540	+

Transcript Sequence
>GWHTAAZE023647 ATTGTGTTGATCAAAGCTAATGCTTCACCTTCTTCTGTGGATCTCACACGTGTGTACTCGGCTGTTGCCAAAGGAGCAGTCTGTCTTGACGGAAGTCCACCAGCGTACCAGTTTGACGAGGGGAAAGGAGAAGGAACCAACAATTGGTTGGTTCACTTAGAGGGCGGTGGATGGTGTAATTCAGTAAGATCGTGCTCAGGCCGTTCAAATGACTCAACTGGTTTGGGTTCATCTAATAAAATGGTACCAAGAGGTTTCTATGGGATTCTGAGCAGCTCAAAGAAAGACAATCCAAACTTCTATAAGTGGAATAGAATTTTGGTGAGATATTGTGATGGATCTTCATTTACTGGGGATGCCGAGAAAGTTTTTAGTGGGTCCAAAGTTTATCTGAGAGGAGCAAGGGTATTTGATGCAATCATGGAAGATCTCTTGGAAAGAGGAATGAAGGATGCATCAAATGCTCTTCTCTCTGGATGCTCAGCTGGTGGTTTGGCATCTATCATGCACTGTGATAAATTCCGAGCTTTAATAGCCACCACAGCTCGAGTTAAATGCCTTTCCGATGGTGGTTATTTCCTCCACGGGAAAGATGTGTATGGAGGCTATCACTTTGAGTATGCGACATTTGATCAAGTTGTTGGCGTACATGGGTCTGCAAAGAATTTGCCACAGACTTGTACTTCAAAGATCAAACCAAGTTTGTGCTTCTACCCACAAAACGTCATTCAACATATCCGCACTCCATTATTTATATTAAACTCAGTCTTTGATAAATGGCAGCTCGAGTACGTTTTCGCCCTAACGTTCCTGCCTATAGTAGGCCGTGCCTGGGTCAAATGCCAAAATAACACGGCCGACTGCTCATTTAGCCAGCTCAAGAGATTGGAAGGTTTACGGTCAGAATTCTTGAACACAATTTTGACTAGGTTGGGTAACCCTTCTTCTAAAGGCTGGTTTATTGATTCTTGTTACACTCATTGCCAATCTTTATCTGGGGAAAGTTGGCATGGACCTAATGTGACATTGAATCACAAGGTACGTAAGACAATACAATTTCAAAGGCCGTTGGGGATTGGTTCTCGACAGGACGTGTGGTGCACCTGGTTGATCAACATAAATCGCCATGTTTGTGTGTGCGTGAAAGATGAAAGCCCCAACAGTCCTAACAATAACTGTATCTAGCATTAGTTCTCGGATAACTTTGTAGTATTTTGCGTCTCTTTTGTACTCAAAAGCCTATAATCGAATGTAATTTCAAACTTAATTATCTGCTGTTGGCTTTTTTTATGGGAACTTATTTT

Network for GWHGAAZE023617

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	7	345	1.50E-125

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	2.688
	SRR3591711	White flower	0.998
	SRR3591712	Green floral bud	0.621
	SRR3591713	Yellow flower	0.211
SRP173429	SRR8316895	Juvenile bud stage	1.415
	SRR8316896	Juvenile bud stage	1.359
	SRR8316897	Juvenile bud stage	1.766
	SRR8316894	Third green stage	1.451
	SRR8316900	Third green stage	2.297
	SRR8316901	Third green stage	1.157
	SRR8316898	Complete white stage	1.955
	SRR8316899	Complete white stage	7.784
	SRR8316903	Complete white stage	3.015
	SRR8316902	Silver flowering stage	2.173
	SRR8316904	Silver flowering stage	1.373
	SRR8316905	Silver flowering stage	0.659
	SRR8316906	Gold flowering stage	1.679
	SRR8316907	Gold flowering stage	1.639
	SRR8316908	Gold flowering stage	4.306
SRP132670	SRR6706286	Control	1.602
	SRR6706287	Light intensity 50%	2.169
	SRR6706288	Light intensity 20%	2.286
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.721
	CNS0095593	Slightly white alabastrum(diploid) 2	2.348
	CNS0095594	Slightly white alabastrum(diploid) 3	1.110
	CNS0095595	Whole white alabastrum(diploid) 2	2.244
	CNS0095596	Whole white alabastrum(diploid) 3	1.238
	CNS0095597	Whole white alabastrum(diploid) 4	1.311
	CNS0095598	Silvery flower (diploied) 1	4.694
	CNS0095599	Silvery flower (diploied) 2	1.933
	CNS0095600	Silvery flower (diploied) 3	1.728
	CNS0095601	Golden flower (diploid) 1	1.375
	CNS0095602	Golden flower (diploid) 2	2.200
	CNS0095603	Golden flower (diploid) 3	2.087
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.397
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.820
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.307
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.801
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.468
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.098
	CNS0095610	Silvery flower (tetraploid) 1	15.108
	CNS0095611	Silvery flower (tetraploid) 2	2.524
	CNS0095612	Silvery flower (tetraploid) 3	2.914
	CNS0095613	Golden flower (tetraploid) 1	2.576
	CNS0095614	Golden flower (tetraploid) 2	11.619
	CNS0095615	Golden flower (tetraploid) 3	5.496
CRA001975	CRR073297	Stem 1	0.662
	CRR073298	Stem 2	0.631
	CRR073299	Stem 3	0.215
	CRR073300	Leaf 1	2.481
	CRR073301	Leaf 2	1.642
	CRR073302	Leaf 3	1.184
	CRR073303	Juvenile bud 1	2.770
	CRR073304	Juvenile bud 2	2.126
	CRR073305	Juvenile bud 3	3.471
	CRR073306	Third green 1	0.091
	CRR073307	Third green 2	0.588
	CRR073308	Third green 3	1.449
	CRR073309	Second white 1	0.170
	CRR073310	Second white 2	0.706
	CRR073311	Second white 3	0.750
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	1.513
	CRR073314	Silver flowering 3	0.267
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000