Gene detail

Detail information of GWHGAAZE023620

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_003548585.1	8.35635E-92	PREDICTED: protein notum homolog [Glycine max]
trEMBL	tr\|I1J855\|I1J855_SOYBN	4E-90	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G35480.2}
TAIR10	AT4G19410.1	2E-68	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	18220601	18223068	+
GWHAAZE00000007	mRNA	18220601	18223068	+
GWHAAZE00000007	exon	18220601	18220617	+
GWHAAZE00000007	exon	18220753	18220819	+
GWHAAZE00000007	exon	18220909	18221038	+
GWHAAZE00000007	exon	18221145	18221227	+
GWHAAZE00000007	exon	18221349	18221435	+
GWHAAZE00000007	exon	18221538	18221662	+
GWHAAZE00000007	exon	18221779	18221842	+
GWHAAZE00000007	exon	18222301	18222409	+
GWHAAZE00000007	exon	18222718	18222866	+
GWHAAZE00000007	exon	18222967	18223068	+
GWHAAZE00000007	CDS	18220601	18220617	+
GWHAAZE00000007	CDS	18220753	18220819	+
GWHAAZE00000007	CDS	18220909	18221038	+
GWHAAZE00000007	CDS	18221145	18221227	+
GWHAAZE00000007	CDS	18221349	18221435	+
GWHAAZE00000007	CDS	18221538	18221662	+
GWHAAZE00000007	CDS	18221779	18221842	+
GWHAAZE00000007	CDS	18222301	18222409	+
GWHAAZE00000007	CDS	18222718	18222866	+
GWHAAZE00000007	CDS	18222967	18223068	+

Transcript Sequence
>GWHTAAZE023650 ATGCTTCCCCTTATTCTTCCGCCGGCGTATCACTTGGACAAGGGACACGGAGAAGGAATCAACAACTGGTTGGTTCACATAGAGGGCGGTGGATGGTGCGACTCACTTGATAGTTGCTCAAAACGTGCAAAAGACCCAAATCTTGGGTCTTCGAATAAAATGCAAAGCAAAGGTTTCTATGGAATTCTAAGCAACTCAAAGAACGACAATCCAAACTTCTATAACTGGAATAGAATTCTGGTTAGATATTGTGACGGATCGTCTTTTACCGGTGATGTAGATGAGAAAGTTTATAAAGGCAAAAAAGTTTATATGAGAGGAGCAAGGGTCTTTGATGCAGTCATAGGAGACCTTCTAGAAAGAGGAATGAAGGATGCATCAAATGCTTTTCTCACTGGATGCTCAGCTGGTGGTTTGGCAACCATACTCCACTGCGATAAATTTGAAGCGTTGCTAGCCACCAAAGCAAGAGTAAAATGCCTTTCCGATGGTGGTTATTTTCTCCATGCGAAAGATTTCTATGGAGGATACCACTTTGAATATGCGAAGTTTGATAAAGTTGTTGGCGTACATCTTGAGTACATTTTCGCACTTACGTATCTGCCTAAAGTTGGCCACTCCTGGATGAAATGCCCAAATAACACAAACTACTGCTCAGCCAGCCAAATCAAGAGATTGGAAGGTTTGCACTCAGAATTCGTGAACACAATTTTAACGAGGTTGGGTAACCACCCTTCCTCTAGAGGCTGGTTCATCGATTCTTGCTATACTCATTGCCAATCTTTGTTTGGGCCGAGTTGGCTTGGACCTAAAGTGAAATTGAATGACAAAACAATTTCTGAGGCTGTTGGGGATTGGTTTTACGACAGACGTCCGGTGCACTTGGTAGATCACAAACATAAATTGCCACATTCGTGTGTACGTGAGAAATGA

Network for GWHGAAZE023620

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	7	188	6.20E-74
PF03283.14	PAE	193	291	2.00E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.334
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	6.530
	SRR3591711	White flower	2.347
	SRR3591712	Green floral bud	8.412
	SRR3591713	Yellow flower	1.439
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.065
	SRR8316897	Juvenile bud stage	0.227
	SRR8316894	Third green stage	0.015
	SRR8316900	Third green stage	0.134
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.018
SRP132670	SRR6706286	Control	0.006
	SRR6706287	Light intensity 50%	0.008
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.267
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.066
	CNS0095596	Whole white alabastrum(diploid) 3	0.026
	CNS0095597	Whole white alabastrum(diploid) 4	0.273
	CNS0095598	Silvery flower (diploied) 1	0.122
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.018
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.086
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.121
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.083
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.044
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.060
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.409
	CNS0095610	Silvery flower (tetraploid) 1	0.732
	CNS0095611	Silvery flower (tetraploid) 2	0.129
	CNS0095612	Silvery flower (tetraploid) 3	0.209
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.934
	CNS0095615	Golden flower (tetraploid) 3	0.113
CRA001975	CRR073297	Stem 1	0.089
	CRR073298	Stem 2	0.051
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.046
	CRR073301	Leaf 2	0.024
	CRR073302	Leaf 3	0.122
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.040
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.039
	CRR073311	Second white 3	0.028
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000