Gene detail

Detail information of GWHGAAZE023626

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007040900.1	1.8018E-68	Pectinacetylesterase family protein [Theobroma cacao]
trEMBL	tr\|A0A061G739\|A0A061G739_THECC	7E-69	Pectinacetylesterase family protein {ECO:0000313\|EMBL:EOY25401.1}
TAIR10	AT4G19420.1	4E-52	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	18863574	18866009	-
GWHAAZE00000007	mRNA	18863574	18866009	-
GWHAAZE00000007	exon	18863574	18863675	-
GWHAAZE00000007	exon	18863779	18863924	-
GWHAAZE00000007	exon	18864024	18864132	-
GWHAAZE00000007	exon	18864599	18864650	-
GWHAAZE00000007	exon	18864774	18864898	-
GWHAAZE00000007	exon	18865002	18865088	-
GWHAAZE00000007	exon	18865499	18865755	-
GWHAAZE00000007	exon	18865886	18866009	-
GWHAAZE00000007	CDS	18865886	18866009	-
GWHAAZE00000007	CDS	18865499	18865755	-
GWHAAZE00000007	CDS	18865002	18865088	-
GWHAAZE00000007	CDS	18864774	18864898	-
GWHAAZE00000007	CDS	18864599	18864650	-
GWHAAZE00000007	CDS	18864024	18864132	-
GWHAAZE00000007	CDS	18863779	18863924	-
GWHAAZE00000007	CDS	18863574	18863675	-

Transcript Sequence
>GWHTAAZE023656 ATGTTGAATGCAACATTCTCCTACATTCTTCTTCTTGTTGCAGTAAATTTATTGATCAAAGCAAATGCTTCCCCTTCTTCTGTGAATCTCACACGTGTCTACTCAGCTGTTGCCAAAGGAGCAGTTTGTCTTGATGGCAGTCCTCCGGCGTACCATTTTGACAAGGGAAAAGGAAAAGGAATCAACAATTGGTTGGTTCACTTAGAGGTATATATATATATATATGTATGTATGACAGTGCAATATAGATGCCATCTCAGAAATAAATTGATGATTTGCATATTTTTCAGGGTGGTGGATGGTGTAACTCAGTTGAAAAGTGCTCAAACCGTTCAAAAGACCCAACTGGTTTGGGGTCTTCCCATAAAATGGTACCAAGAGGGGTCCGAAATTTACTTTAGAGGAGCAAGGGTGTTTGATGCTATCATGGAAGACCTTTTAGAAAGAGGAATGGAGGATGCATCAAATGCTCTTCTCTCTGGATGCTCAGCCGGTGGTTTGGCATCTATATTGCACTGTGACAAATTTCGAGCATTGCTAGCCACCGAAGCTAGAGTAAAGTGTCTTTCGGATGGTGGATATTTTCTCCATGCGAAAGATTTCTATGGAGGATATCACTTTGAGTATAATACCTTCGATAAAGTTCTGGAGAACATTTTCGCGCTAACGTATCTACCGAAAGTTGGCCGCTCCTGGATAAAATGCCATAATAACACAGCCTACTGCTCATCTAGCCAACTCAAGAGATTGGAAGGTCTACGGTCAGAATTCCTGAACACAATTTTGACTAGGTTAGGTAACCCTTCCTCTAGAGGCTGGTTCATCAATTCTTGTTATGATCATTGTCAATCTGTGTCTGGGCCCCGTTGGCTTGGACATAATGTGACACTGGATGACAAGACAATTTCCGTGGCGGTTGGGGATTGGTTTTATGACAAACGTGTTGTGCACTTGGTAGATCACAAATATAACTTGCCGCGTTTGTGTGTGCATGACAAATGA

Network for GWHGAAZE023626

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	22	73	4.40E-16
PF03283.14	PAE	125	216	5.60E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.168
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	7.735
	SRR3591711	White flower	0.411
	SRR3591712	Green floral bud	11.309
	SRR3591713	Yellow flower	0.273
SRP173429	SRR8316895	Juvenile bud stage	4.172
	SRR8316896	Juvenile bud stage	6.584
	SRR8316897	Juvenile bud stage	5.285
	SRR8316894	Third green stage	1.880
	SRR8316900	Third green stage	8.456
	SRR8316901	Third green stage	3.048
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.043
	SRR8316903	Complete white stage	0.246
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.092
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	9.063
	SRR6706287	Light intensity 50%	7.299
	SRR6706288	Light intensity 20%	8.353
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.283
	CNS0095593	Slightly white alabastrum(diploid) 2	1.297
	CNS0095594	Slightly white alabastrum(diploid) 3	0.578
	CNS0095595	Whole white alabastrum(diploid) 2	1.346
	CNS0095596	Whole white alabastrum(diploid) 3	1.660
	CNS0095597	Whole white alabastrum(diploid) 4	1.041
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.074
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.067
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.159
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.088
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.091
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.089
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.202
	CNS0095609	Whole white alabastrum(tetraploid) 3	15.882
	CNS0095610	Silvery flower (tetraploid) 1	17.278
	CNS0095611	Silvery flower (tetraploid) 2	3.249
	CNS0095612	Silvery flower (tetraploid) 3	4.944
	CNS0095613	Golden flower (tetraploid) 1	0.627
	CNS0095614	Golden flower (tetraploid) 2	14.671
	CNS0095615	Golden flower (tetraploid) 3	4.666
CRA001975	CRR073297	Stem 1	0.923
	CRR073298	Stem 2	0.042
	CRR073299	Stem 3	0.786
	CRR073300	Leaf 1	1.313
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.593
	CRR073303	Juvenile bud 1	0.068
	CRR073304	Juvenile bud 2	1.118
	CRR073305	Juvenile bud 3	0.102
	CRR073306	Third green 1	0.035
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.221
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000