Gene detail

Detail information of GWHGAAZE023638

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KCW72720.1	2.1235E-101	hypothetical protein EUGRSUZ_E01169 [Eucalyptus grandis]
trEMBL	tr\|A0A059C445\|A0A059C445_EUCGR	8E-102	Uncharacterized protein {ECO:0000313\|EMBL:KCW72720.1}
TAIR10	AT4G19420.1	8E-83	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	20037344	20040360	-
GWHAAZE00000007	mRNA	20037344	20040360	-
GWHAAZE00000007	exon	20040240	20040360	-
GWHAAZE00000007	exon	20040057	20040127	-
GWHAAZE00000007	exon	20039730	20039862	-
GWHAAZE00000007	exon	20039548	20039627	-
GWHAAZE00000007	exon	20039085	20039209	-
GWHAAZE00000007	exon	20038908	20038971	-
GWHAAZE00000007	exon	20038740	20038793	-
GWHAAZE00000007	exon	20038579	20038656	-
GWHAAZE00000007	exon	20038425	20038473	-
GWHAAZE00000007	exon	20037684	20037829	-
GWHAAZE00000007	exon	20037344	20037589	-
GWHAAZE00000007	CDS	20040240	20040360	-
GWHAAZE00000007	CDS	20040057	20040127	-
GWHAAZE00000007	CDS	20039730	20039862	-
GWHAAZE00000007	CDS	20039548	20039627	-
GWHAAZE00000007	CDS	20039085	20039209	-
GWHAAZE00000007	CDS	20038908	20038971	-
GWHAAZE00000007	CDS	20038740	20038793	-
GWHAAZE00000007	CDS	20038579	20038656	-
GWHAAZE00000007	CDS	20038425	20038473	-
GWHAAZE00000007	CDS	20037684	20037829	-
GWHAAZE00000007	CDS	20037491	20037589	-
GWHAAZE00000007	three_prime_UTR	20037344	20037490	-

Transcript Sequence
>GWHTAAZE023668 ATGGAGTATACAACATTCTCCTACCTTCTTGTTGTTCTACTAATTGTATTGATCCAAGCCAATGCTTCCCCTGTGGCTGTCGATCTCACACGTGTCTATGCTGCTGCTGCCAAAGGAGCAGTTTGTCTTGACGGAAGTCCGCCAGCCTATCAGTTTGACAAGGGAAATAGAAAAGGAATCAACAATTGGTTGGGTGGTGGATGGTGTAACTCAGTAGCAAAGTGCTCAGGCCGTTCAAATGATCCAACTGGTTTGGGTTCTTCCAACAGAATGGTACCAGTAGGTTTCTATGGAATTCTGAGCAACTCGAAGAAAGAAAATCCAAACTTCTATAACTGGAATAGAATTTTGGTTAGGTATTGTGATGGATCGTCATTAACCGGTGATGCAGTGAAAGTTTATAATGCTCTTCTCTCTGGATGCTCAGCTGGTGGTTTGGCATCTATCATGCACTGTGATAAATTCCGAACATTAATAGCCACCACAGCTAGAGTAAAATGCCTTTCCGATGGTGGTTATTTTCTCCATGGGAAAGATGTGTATGGAGGCTATCACTTTGAATATGAGACTTTCGATAAAGTTGTTGGCGTACATGGGTCAGCGAAGAATTTGCCACAAACTTGTACATCAAAGATTAAACCAAGTTTGTGCTTCTACCCACAAAACGTCATTCAACATATCCGCACTCCATTATTCATTTTAAACTCAGTCTTTGATAAATGGCAGCTCGATGCGTTTTGCACTAACGTACCTTCCTATAGTAGGCCGTGCTTGGGTTTACGGTCAGAATTCTTGAACACAATTCTGACTAGGTTGGGCAATCCTTCCTCTAATGGCTGGTTTATTGATTCTTGTTACACTCATTGCCAATCTCTATCTGGGGACAGTTGGCTTGGACCTAATGTGACATTGAATCACAAGACAATTTCGAAGGCCGTTGGGGATTGGTTCTATGACAGACGTGTGGTGCACCTGGTTGATCAACGTAACTCGCCACGTTTGTGTGTGCATGAAAAATGAAAGCCCTAACAGTCCTAACAATAACTATATCTAGCATTAGTTCTTGGATAACTTTGTAGTATTTTGTGTCTCTTTTGTACTCAAAACGTATTATCACATGTAATTTCAAACTTAATTATCTGTTTTTGGCTTATTTTTTTTTCTATT

Network for GWHGAAZE023638

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0138

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	21	131	2.20E-37
PF03283.14	PAE	134	321	7.90E-55

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	2.260
	SRR3591711	White flower	0.587
	SRR3591712	Green floral bud	1.014
	SRR3591713	Yellow flower	0.050
SRP173429	SRR8316895	Juvenile bud stage	0.631
	SRR8316896	Juvenile bud stage	0.233
	SRR8316897	Juvenile bud stage	0.122
	SRR8316894	Third green stage	0.669
	SRR8316900	Third green stage	1.145
	SRR8316901	Third green stage	0.345
	SRR8316898	Complete white stage	3.190
	SRR8316899	Complete white stage	9.284
	SRR8316903	Complete white stage	2.450
	SRR8316902	Silver flowering stage	0.271
	SRR8316904	Silver flowering stage	0.044
	SRR8316905	Silver flowering stage	0.115
	SRR8316906	Gold flowering stage	0.068
	SRR8316907	Gold flowering stage	0.194
	SRR8316908	Gold flowering stage	0.273
SRP132670	SRR6706286	Control	1.387
	SRR6706287	Light intensity 50%	1.544
	SRR6706288	Light intensity 20%	1.834
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.395
	CNS0095593	Slightly white alabastrum(diploid) 2	1.033
	CNS0095594	Slightly white alabastrum(diploid) 3	0.842
	CNS0095595	Whole white alabastrum(diploid) 2	0.822
	CNS0095596	Whole white alabastrum(diploid) 3	0.499
	CNS0095597	Whole white alabastrum(diploid) 4	0.860
	CNS0095598	Silvery flower (diploied) 1	3.287
	CNS0095599	Silvery flower (diploied) 2	0.517
	CNS0095600	Silvery flower (diploied) 3	0.600
	CNS0095601	Golden flower (diploid) 1	0.865
	CNS0095602	Golden flower (diploid) 2	0.772
	CNS0095603	Golden flower (diploid) 3	0.921
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.667
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.632
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.370
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.239
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.431
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.776
	CNS0095610	Silvery flower (tetraploid) 1	1.028
	CNS0095611	Silvery flower (tetraploid) 2	1.098
	CNS0095612	Silvery flower (tetraploid) 3	0.404
	CNS0095613	Golden flower (tetraploid) 1	0.526
	CNS0095614	Golden flower (tetraploid) 2	2.845
	CNS0095615	Golden flower (tetraploid) 3	1.041
CRA001975	CRR073297	Stem 1	0.552
	CRR073298	Stem 2	0.706
	CRR073299	Stem 3	0.589
	CRR073300	Leaf 1	0.972
	CRR073301	Leaf 2	0.740
	CRR073302	Leaf 3	2.436
	CRR073303	Juvenile bud 1	5.356
	CRR073304	Juvenile bud 2	1.710
	CRR073305	Juvenile bud 3	2.848
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.200
	CRR073308	Third green 3	0.216
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.012
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000