Gene detail

Detail information of GWHGAAZE023699

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP13460.1	0	unnamed protein product [Coffea canephora]
COG	YP_007126612.1	4E-56	Unspecific monooxygenase
Swissprot	tr\|H2DH21\|C7A29_PANGI	3E-172	Cytochrome P450 CYP72A219
trEMBL	tr\|A0A068UY35\|A0A068UY35_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_75 {ECO:0000313\|EMBL:CDP13460.1}
TAIR10	AT3G14620.1	1E-135	cytochrome P450, family 72, subfamily A, polypeptide 8

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	22737688	22741109	-
GWHAAZE00000007	mRNA	22737688	22741109	-
GWHAAZE00000007	exon	22737688	22738098	-
GWHAAZE00000007	exon	22738177	22738540	-
GWHAAZE00000007	exon	22738636	22738880	-
GWHAAZE00000007	exon	22738963	22739183	-
GWHAAZE00000007	exon	22740830	22741109	-
GWHAAZE00000007	CDS	22740830	22741109	-
GWHAAZE00000007	CDS	22738963	22739183	-
GWHAAZE00000007	CDS	22738636	22738880	-
GWHAAZE00000007	CDS	22738177	22738540	-
GWHAAZE00000007	CDS	22737688	22738098	-

Transcript Sequence
>GWHTAAZE023729 ATGGAAAGTTTATCAATGTTGAAAGCCTTGGCTTTTTCTTTTGTTGCACTGATTTTGTGGTTTATTTTGAGAGTTTATAATTCAATTTGGTGGAAACCCAAAAGACTTGAGAAGCAACTGAAGCAGCAAGGAATAAGTGGCACTTCTTACAAGCTTTTGTATGGTGATATGAAAGAGTCCAAGAGGTTGATGATGGAAGCTTGGTCCAAGCCCATGAATCTATCCCACCAGATTGCGCCACGTGTCAATCCCTTCTACTATCAGACGGTCCAAAAATATGGAAAAATATGTGTTACATGGATCGGAACGAAGCCGAGGGTGATAGTAGCGGATCCAGAGTTGATGAGGTTTATATTAACGGACAAGAATGGCGATTTTGAGAAGCCACCCGTAAACCCTCTAATAGATCTCCTAACACTCGGCGTGTCTACCTTGGAGAGAGACAAATGGGCCAAACGCCGGAAACTCATTTCTCCAGCTTTCCTCCACGACAAAATACAGGGGATGGTGCCAGTGTTTTCAATAAGTTGTTGTAATTTGATTGATAGGTGGATAAAGTTAGTAGGTTCTCAAGAATCGTATGAATTAGATATTTCACCTGAATTGCAAAATCTTTCGGCGGATGTAATTGCCAGAGCTGCATTTGGTAGCACCATTGAGGAAGGAAAGCAGATATTTGAACTCCAAAGAGAGCAAGTTGTGCTTGTGATCGAAGCTGCCCAAGCCATTTATATTCCCGGTCTCAGATTTCTACCTACGAAAAAGAACAAGAGGAGATACGAGATAGACAATCTAATAAAAGCAATGTTAAGGGAATTGATCCAAGAGAAAGAGATGGCCATGGCAAATGGAGAAACGATTGGCGATGATCTGCTGAGCTTGATGCTTCAATGCAAAGGACAATCTGATAGCAACATGACAATTGAAGACGTAATAGAAGAATGCAAGTTATTTTACTTTGCCGGCCAGGAGACCACCGCTAATTGGCTTACATGGACAATGATAGTACTTTCTATGCACCCCGATTGGCAAGACAAAGCAAGGCAAGAGGTTCAACAAATTTGCGGGGGAAATGTGCCAGATCTTCAAGCTGTAAACCGCCTTAAAATCGTTTCAATGGTTCTACAAGAAGTCATTAGACTATACCCACCGGTGACAGGCCAATTTCGACACACTTATCGCAAAACCAAAATTGGTGGCATGTCAATCCCTGCTGGAGTCGAATTTTTCTTGCCAACATTGATGCTTCATCACAACCCCAAGTATTGGGGCGACGATGTTGATGAATTCAAACCTGCAGAGAGATTTTCAGAAGGAGTCTCGAAGGCATTATATCCGTTTGGGTGGGGACCAAGGTTTTGTTTGGGACAAAGCTTTGCGATTATTGAAGCTAAGTTGGCTCTTTCAATGATTCTGCAAAACTTCACCTTTGAGCTCTCGCCTTCTTACACGCATGCTCCTTACACTATTATAACTCTTCAACCACAACATGGAGCTCCACTTATAATACGTCGAATTTGA

Network for GWHGAAZE023699

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	85	482	2.50E-80

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	11.134
	SRR3591706	second leaf	3.232
	SRR3591707	mature leaf	5.454
	SRR3591708	Shoot apex	5.527
	SRR3591709	Stem	4.203
	SRR3591710	White floral bud	0.988
	SRR3591711	White flower	1.199
	SRR3591712	Green floral bud	0.866
	SRR3591713	Yellow flower	0.410
SRP173429	SRR8316895	Juvenile bud stage	3.343
	SRR8316896	Juvenile bud stage	3.995
	SRR8316897	Juvenile bud stage	3.444
	SRR8316894	Third green stage	1.721
	SRR8316900	Third green stage	4.157
	SRR8316901	Third green stage	3.108
	SRR8316898	Complete white stage	1.178
	SRR8316899	Complete white stage	2.892
	SRR8316903	Complete white stage	1.489
	SRR8316902	Silver flowering stage	0.789
	SRR8316904	Silver flowering stage	1.533
	SRR8316905	Silver flowering stage	0.902
	SRR8316906	Gold flowering stage	1.192
	SRR8316907	Gold flowering stage	1.132
	SRR8316908	Gold flowering stage	5.078
SRP132670	SRR6706286	Control	5.517
	SRR6706287	Light intensity 50%	5.432
	SRR6706288	Light intensity 20%	4.434
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.040
	CNS0095593	Slightly white alabastrum(diploid) 2	4.038
	CNS0095594	Slightly white alabastrum(diploid) 3	3.311
	CNS0095595	Whole white alabastrum(diploid) 2	5.264
	CNS0095596	Whole white alabastrum(diploid) 3	2.537
	CNS0095597	Whole white alabastrum(diploid) 4	4.074
	CNS0095598	Silvery flower (diploied) 1	4.981
	CNS0095599	Silvery flower (diploied) 2	5.268
	CNS0095600	Silvery flower (diploied) 3	1.600
	CNS0095601	Golden flower (diploid) 1	4.904
	CNS0095602	Golden flower (diploid) 2	2.379
	CNS0095603	Golden flower (diploid) 3	2.154
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.581
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.549
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.111
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.887
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.260
	CNS0095609	Whole white alabastrum(tetraploid) 3	5.604
	CNS0095610	Silvery flower (tetraploid) 1	1.373
	CNS0095611	Silvery flower (tetraploid) 2	1.553
	CNS0095612	Silvery flower (tetraploid) 3	0.925
	CNS0095613	Golden flower (tetraploid) 1	2.018
	CNS0095614	Golden flower (tetraploid) 2	1.061
	CNS0095615	Golden flower (tetraploid) 3	0.360
CRA001975	CRR073297	Stem 1	3.128
	CRR073298	Stem 2	3.732
	CRR073299	Stem 3	3.269
	CRR073300	Leaf 1	3.548
	CRR073301	Leaf 2	3.214
	CRR073302	Leaf 3	1.772
	CRR073303	Juvenile bud 1	1.419
	CRR073304	Juvenile bud 2	2.466
	CRR073305	Juvenile bud 3	1.900
	CRR073306	Third green 1	2.281
	CRR073307	Third green 2	3.035
	CRR073308	Third green 3	1.161
	CRR073309	Second white 1	0.287
	CRR073310	Second white 2	0.951
	CRR073311	Second white 3	3.171
	CRR073312	Silver flowering 1	0.409
	CRR073313	Silver flowering 2	1.084
	CRR073314	Silver flowering 3	0.550
	CRR073315	Gold flowering 1	3.800
	CRR073316	Gold flowering 2	5.923
	CRR073317	Gold flowering 3	3.298
	CRR073318	Tawny withering 1	2.529
	CRR073319	Tawny withering 2	1.773
	CRR073320	Tawny withering 3	0.701