Detail information of GWHGAAZE023728


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009759046.14.185E-106PREDICTED: omega-amidase,chloroplastic isoform X2 [Nicotiana sylvestris]
COGYP_001086961.13E-51carbon-nitrogen hydrolase
Swissprottr|Q8RUF8|NILP3_ARATH2E-94Omega-amidase,chloroplastic (Precursor)
trEMBLtr|V4UUI4|V4UUI4_9ROSI1E-102Uncharacterized protein {ECO:0000313|EMBL:ESR66266.1}
TAIR10AT5G12040.11E-68Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2400203224008927-
GWHAAZE00000007mRNA2400203224008927-
GWHAAZE00000007exon2400203224002283-
GWHAAZE00000007exon2400273824002753-
GWHAAZE00000007exon2400335924003386-
GWHAAZE00000007exon2400361224003652-
GWHAAZE00000007exon2400395624004066-
GWHAAZE00000007exon2400479624004871-
GWHAAZE00000007exon2400615024006243-
GWHAAZE00000007exon2400676224006917-
GWHAAZE00000007exon2400771224007828-
GWHAAZE00000007exon2400866724008927-
GWHAAZE00000007CDS2400866724008927-
GWHAAZE00000007CDS2400771224007828-
GWHAAZE00000007CDS2400676224006917-
GWHAAZE00000007CDS2400615024006243-
GWHAAZE00000007CDS2400479624004871-
GWHAAZE00000007CDS2400395624004066-
GWHAAZE00000007CDS2400361224003652-
GWHAAZE00000007CDS2400335924003386-
GWHAAZE00000007CDS2400273824002753-
GWHAAZE00000007CDS2400203224002283-
Transcript Sequence

Network for GWHGAAZE023728

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00795.23CN_hydrolase902722.20E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13566NIT2, yafV Metabolic pathways map01100
Alanine, aspartate and glutamate metabolismmap00250

Gene Ontology

GO term OntologyName
GO:0006807biological_processnitrogen compound metabolic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.826
SRR3591706second leaf21.378
SRR3591707mature leaf8.437
SRR3591708Shoot apex23.477
SRR3591709Stem24.098
SRR3591710White floral bud22.363
SRR3591711White flower27.296
SRR3591712Green floral bud23.135
SRR3591713Yellow flower24.717
SRP173429 SRR8316895Juvenile bud stage 6.721
SRR8316896Juvenile bud stage 8.045
SRR8316897Juvenile bud stage 0.657
SRR8316894Third green stage 4.590
SRR8316900Third green stage 12.523
SRR8316901Third green stage 11.619
SRR8316898Complete white stage 4.683
SRR8316899Complete white stage 11.965
SRR8316903Complete white stage 9.831
SRR8316902Silver flowering stage4.150
SRR8316904Silver flowering stage7.834
SRR8316905Silver flowering stage3.417
SRR8316906Gold flowering stage 8.212
SRR8316907Gold flowering stage 8.462
SRR8316908Gold flowering stage 2.694
SRP132670SRR6706286Control25.982
SRR6706287Light intensity 50%29.135
SRR6706288Light intensity 20%30.577
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.614
CNS0095593Slightly white alabastrum(diploid) 26.353
CNS0095594Slightly white alabastrum(diploid) 34.005
CNS0095595Whole white alabastrum(diploid) 25.146
CNS0095596Whole white alabastrum(diploid) 34.360
CNS0095597Whole white alabastrum(diploid) 45.060
CNS0095598Silvery flower (diploied) 14.239
CNS0095599Silvery flower (diploied) 25.409
CNS0095600Silvery flower (diploied) 39.818
CNS0095601Golden flower (diploid) 13.646
CNS0095602Golden flower (diploid) 27.891
CNS0095603Golden flower (diploid) 37.369
CNS0095604Slightly white alabastrum(tetraploid) 18.793
CNS0095605Slightly white alabastrum(tetraploid) 26.697
CNS0095606Slightly white alabastrum(tetraploid) 314.042
CNS0095607Whole white alabastrum(tetraploid) 13.925
CNS0095608Whole white alabastrum(tetraploid) 25.595
CNS0095609Whole white alabastrum(tetraploid) 315.269
CNS0095610Silvery flower (tetraploid) 19.629
CNS0095611Silvery flower (tetraploid) 211.890
CNS0095612Silvery flower (tetraploid) 38.912
CNS0095613Golden flower (tetraploid) 14.096
CNS0095614Golden flower (tetraploid) 26.699
CNS0095615Golden flower (tetraploid) 35.003
CRA001975CRR073297Stem 110.581
CRR073298Stem 211.764
CRR073299Stem 311.129
CRR073300Leaf 114.536
CRR073301Leaf 214.900
CRR073302Leaf 310.409
CRR073303Juvenile bud 112.426
CRR073304Juvenile bud 215.077
CRR073305Juvenile bud 315.652
CRR073306Third green 111.837
CRR073307Third green 29.737
CRR073308Third green 39.071
CRR073309Second white 110.549
CRR073310Second white 27.960
CRR073311Second white 37.572
CRR073312Silver flowering 15.620
CRR073313Silver flowering 25.106
CRR073314Silver flowering 34.486
CRR073315Gold flowering 15.247
CRR073316Gold flowering 28.460
CRR073317Gold flowering 36.824
CRR073318Tawny withering 17.744
CRR073319Tawny withering 28.028
CRR073320Tawny withering 36.805