Detail information of GWHGAAZE023812


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279085.10PREDICTED: UDP-sulfoquinovose synthase, chloroplastic [Vitis vinifera]
COGYP_007093680.10UDP-sulfoquinovose synthase
Swissprottr|Q84KI6|SQD1_SPIOL0UDP-sulfoquinovose synthase, chloroplastic (Precursor)
trEMBLtr|F6H3N4|F6H3N4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB46567.1}
TAIR10AT4G33030.10sulfoquinovosyldiacylglycerol 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2691534126917776-
GWHAAZE00000007mRNA2691534126917776-
GWHAAZE00000007exon2691673026917776-
GWHAAZE00000007exon2691534126915742-
GWHAAZE00000007CDS2691673026917776-
GWHAAZE00000007CDS2691534126915742-
Transcript Sequence

Network for GWHGAAZE023812

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.22Epimerase923805.60E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06118SQD1, sqdB Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520
Glycerolipid metabolismmap00561

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0050662molecular_functioncoenzyme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.973
SRR3591706second leaf48.018
SRR3591707mature leaf56.187
SRR3591708Shoot apex44.965
SRR3591709Stem22.556
SRR3591710White floral bud57.454
SRR3591711White flower73.035
SRR3591712Green floral bud57.774
SRR3591713Yellow flower97.756
SRP173429 SRR8316895Juvenile bud stage 13.626
SRR8316896Juvenile bud stage 18.923
SRR8316897Juvenile bud stage 17.806
SRR8316894Third green stage 13.507
SRR8316900Third green stage 50.489
SRR8316901Third green stage 32.290
SRR8316898Complete white stage 21.338
SRR8316899Complete white stage 44.904
SRR8316903Complete white stage 34.346
SRR8316902Silver flowering stage32.836
SRR8316904Silver flowering stage45.252
SRR8316905Silver flowering stage25.888
SRR8316906Gold flowering stage 35.724
SRR8316907Gold flowering stage 62.350
SRR8316908Gold flowering stage 57.298
SRP132670SRR6706286Control49.622
SRR6706287Light intensity 50%51.694
SRR6706288Light intensity 20%52.839
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.268
CNS0095593Slightly white alabastrum(diploid) 212.712
CNS0095594Slightly white alabastrum(diploid) 311.280
CNS0095595Whole white alabastrum(diploid) 213.883
CNS0095596Whole white alabastrum(diploid) 316.137
CNS0095597Whole white alabastrum(diploid) 413.720
CNS0095598Silvery flower (diploied) 128.082
CNS0095599Silvery flower (diploied) 231.294
CNS0095600Silvery flower (diploied) 349.270
CNS0095601Golden flower (diploid) 121.583
CNS0095602Golden flower (diploid) 242.358
CNS0095603Golden flower (diploid) 347.185
CNS0095604Slightly white alabastrum(tetraploid) 122.956
CNS0095605Slightly white alabastrum(tetraploid) 217.722
CNS0095606Slightly white alabastrum(tetraploid) 339.266
CNS0095607Whole white alabastrum(tetraploid) 111.653
CNS0095608Whole white alabastrum(tetraploid) 212.984
CNS0095609Whole white alabastrum(tetraploid) 342.558
CNS0095610Silvery flower (tetraploid) 157.150
CNS0095611Silvery flower (tetraploid) 297.600
CNS0095612Silvery flower (tetraploid) 378.597
CNS0095613Golden flower (tetraploid) 131.569
CNS0095614Golden flower (tetraploid) 246.170
CNS0095615Golden flower (tetraploid) 353.309
CRA001975CRR073297Stem 143.037
CRR073298Stem 241.333
CRR073299Stem 354.906
CRR073300Leaf 150.853
CRR073301Leaf 252.913
CRR073302Leaf 355.395
CRR073303Juvenile bud 153.620
CRR073304Juvenile bud 264.403
CRR073305Juvenile bud 363.265
CRR073306Third green 146.716
CRR073307Third green 229.069
CRR073308Third green 339.461
CRR073309Second white 154.778
CRR073310Second white 241.039
CRR073311Second white 341.052
CRR073312Silver flowering 128.059
CRR073313Silver flowering 229.358
CRR073314Silver flowering 332.740
CRR073315Gold flowering 185.094
CRR073316Gold flowering 2110.373
CRR073317Gold flowering 398.098
CRR073318Tawny withering 126.529
CRR073319Tawny withering 221.518
CRR073320Tawny withering 323.896