Detail information of GWHGAAZE023825


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007012271.16.218E-132Uncharacterized protein isoform 1 [Theobroma cacao]
Swissprottr|F4ITL6|RTE1_ARATH2E-117Protein REVERSION-TO-ETHYLENE SENSITIVITY1
trEMBLtr|A0A061GJ35|A0A061GJ35_THECC2E-132Uncharacterized protein isoform 1 {ECO:0000313|EMBL:EOY29890.1}
TAIR10AT2G26070.12E-79Protein of unknown function (DUF778)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2728276227284916+
GWHAAZE00000007mRNA2728276227284916+
GWHAAZE00000007exon2728276227283052+
GWHAAZE00000007exon2728449427284916+
GWHAAZE00000007CDS2728276227283052+
GWHAAZE00000007CDS2728449427284916+
Transcript Sequence

Network for GWHGAAZE023825

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05608.13DUF77846952.30E-21
PF05608.13DUF778961817.30E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20726TMEM222 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.903
SRR3591706second leaf8.218
SRR3591707mature leaf8.716
SRR3591708Shoot apex8.894
SRR3591709Stem13.186
SRR3591710White floral bud5.015
SRR3591711White flower3.309
SRR3591712Green floral bud5.754
SRR3591713Yellow flower1.626
SRP173429 SRR8316895Juvenile bud stage 0.655
SRR8316896Juvenile bud stage 1.534
SRR8316897Juvenile bud stage 2.969
SRR8316894Third green stage 0.855
SRR8316900Third green stage 1.787
SRR8316901Third green stage 2.321
SRR8316898Complete white stage 1.566
SRR8316899Complete white stage 3.407
SRR8316903Complete white stage 2.189
SRR8316902Silver flowering stage1.468
SRR8316904Silver flowering stage1.698
SRR8316905Silver flowering stage1.440
SRR8316906Gold flowering stage 3.185
SRR8316907Gold flowering stage 2.519
SRR8316908Gold flowering stage 6.042
SRP132670SRR6706286Control2.444
SRR6706287Light intensity 50%0.993
SRR6706288Light intensity 20%1.363
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.353
CNS0095593Slightly white alabastrum(diploid) 21.536
CNS0095594Slightly white alabastrum(diploid) 31.708
CNS0095595Whole white alabastrum(diploid) 21.305
CNS0095596Whole white alabastrum(diploid) 31.946
CNS0095597Whole white alabastrum(diploid) 41.217
CNS0095598Silvery flower (diploied) 19.189
CNS0095599Silvery flower (diploied) 26.170
CNS0095600Silvery flower (diploied) 36.805
CNS0095601Golden flower (diploid) 18.764
CNS0095602Golden flower (diploid) 26.279
CNS0095603Golden flower (diploid) 35.790
CNS0095604Slightly white alabastrum(tetraploid) 12.399
CNS0095605Slightly white alabastrum(tetraploid) 22.882
CNS0095606Slightly white alabastrum(tetraploid) 32.324
CNS0095607Whole white alabastrum(tetraploid) 11.918
CNS0095608Whole white alabastrum(tetraploid) 20.858
CNS0095609Whole white alabastrum(tetraploid) 33.807
CNS0095610Silvery flower (tetraploid) 14.414
CNS0095611Silvery flower (tetraploid) 23.224
CNS0095612Silvery flower (tetraploid) 32.260
CNS0095613Golden flower (tetraploid) 11.273
CNS0095614Golden flower (tetraploid) 25.328
CNS0095615Golden flower (tetraploid) 31.562
CRA001975CRR073297Stem 12.453
CRR073298Stem 24.071
CRR073299Stem 35.135
CRR073300Leaf 12.600
CRR073301Leaf 23.013
CRR073302Leaf 32.752
CRR073303Juvenile bud 11.947
CRR073304Juvenile bud 22.420
CRR073305Juvenile bud 33.107
CRR073306Third green 11.803
CRR073307Third green 21.342
CRR073308Third green 31.208
CRR073309Second white 10.128
CRR073310Second white 20.271
CRR073311Second white 30.237
CRR073312Silver flowering 10.267
CRR073313Silver flowering 20.382
CRR073314Silver flowering 30.340
CRR073315Gold flowering 15.433
CRR073316Gold flowering 211.444
CRR073317Gold flowering 37.315
CRR073318Tawny withering 17.519
CRR073319Tawny withering 211.473
CRR073320Tawny withering 35.855