Detail information of GWHGAAZE023851


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU31702.14.1759E-06hypothetical protein MIMGU_mgv1a019751mg [Erythranthe guttata]
trEMBLtr|A0A022QSJ2|A0A022QSJ2_ERYGU0.000002Uncharacterized protein {ECO:0000313|EMBL:EYU31702.1}
TAIR10AT1G47300.10.00007F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2815575228157113+
GWHAAZE00000007mRNA2815575228157113+
GWHAAZE00000007exon2815575228157113+
GWHAAZE00000007CDS2815575228157113+
Transcript Sequence

Network for GWHGAAZE023851

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box14518.90E-05
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.997
SRR3591706second leaf1.224
SRR3591707mature leaf1.966
SRR3591708Shoot apex3.500
SRR3591709Stem2.637
SRR3591710White floral bud2.958
SRR3591711White flower3.045
SRR3591712Green floral bud4.987
SRR3591713Yellow flower0.907
SRP173429 SRR8316895Juvenile bud stage 5.037
SRR8316896Juvenile bud stage 9.217
SRR8316897Juvenile bud stage 2.894
SRR8316894Third green stage 3.054
SRR8316900Third green stage 6.386
SRR8316901Third green stage 4.731
SRR8316898Complete white stage 0.700
SRR8316899Complete white stage 4.345
SRR8316903Complete white stage 2.047
SRR8316902Silver flowering stage0.509
SRR8316904Silver flowering stage0.774
SRR8316905Silver flowering stage0.170
SRR8316906Gold flowering stage 0.688
SRR8316907Gold flowering stage 0.783
SRR8316908Gold flowering stage 0.474
SRP132670SRR6706286Control5.227
SRR6706287Light intensity 50%6.066
SRR6706288Light intensity 20%6.399
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.962
CNS0095593Slightly white alabastrum(diploid) 24.882
CNS0095594Slightly white alabastrum(diploid) 35.623
CNS0095595Whole white alabastrum(diploid) 26.358
CNS0095596Whole white alabastrum(diploid) 36.172
CNS0095597Whole white alabastrum(diploid) 45.091
CNS0095598Silvery flower (diploied) 13.633
CNS0095599Silvery flower (diploied) 21.871
CNS0095600Silvery flower (diploied) 33.220
CNS0095601Golden flower (diploid) 13.520
CNS0095602Golden flower (diploid) 24.473
CNS0095603Golden flower (diploid) 35.250
CNS0095604Slightly white alabastrum(tetraploid) 110.105
CNS0095605Slightly white alabastrum(tetraploid) 29.832
CNS0095606Slightly white alabastrum(tetraploid) 39.481
CNS0095607Whole white alabastrum(tetraploid) 17.812
CNS0095608Whole white alabastrum(tetraploid) 26.492
CNS0095609Whole white alabastrum(tetraploid) 39.568
CNS0095610Silvery flower (tetraploid) 14.538
CNS0095611Silvery flower (tetraploid) 25.937
CNS0095612Silvery flower (tetraploid) 33.585
CNS0095613Golden flower (tetraploid) 11.085
CNS0095614Golden flower (tetraploid) 22.923
CNS0095615Golden flower (tetraploid) 31.796
CRA001975CRR073297Stem 16.324
CRR073298Stem 24.419
CRR073299Stem 35.050
CRR073300Leaf 15.379
CRR073301Leaf 24.913
CRR073302Leaf 34.889
CRR073303Juvenile bud 13.534
CRR073304Juvenile bud 23.692
CRR073305Juvenile bud 33.522
CRR073306Third green 10.665
CRR073307Third green 20.866
CRR073308Third green 30.452
CRR073309Second white 10.289
CRR073310Second white 20.475
CRR073311Second white 30.131
CRR073312Silver flowering 10.119
CRR073313Silver flowering 20.462
CRR073314Silver flowering 30.472
CRR073315Gold flowering 11.915
CRR073316Gold flowering 22.759
CRR073317Gold flowering 32.114
CRR073318Tawny withering 13.271
CRR073319Tawny withering 22.762
CRR073320Tawny withering 32.407