Detail information of GWHGAAZE023873


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007205460.10hypothetical protein PRUPE_ppa007906mg [Prunus persica]
Swissprottr|Q9FFD2|RGP5_ARATH5E-166Probable UDP-arabinopyranose mutase 5
trEMBLtr|M5WIM7|M5WIM7_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ06660.1}
TAIR10AT5G16510.22E-130Alpha-1,4-glucan-protein synthase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2857611328577102-
GWHAAZE00000007mRNA2857611328577102-
GWHAAZE00000007exon2857702028577102-
GWHAAZE00000007exon2857611328576989-
GWHAAZE00000007CDS2857702028577102-
GWHAAZE00000007CDS2857611328576989-
Transcript Sequence

Network for GWHGAAZE023873

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03214.14RGP13161.70E-164
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13379RGP, UTM Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf52.737
SRR3591706second leaf24.145
SRR3591707mature leaf20.651
SRR3591708Shoot apex39.440
SRR3591709Stem49.420
SRR3591710White floral bud70.751
SRR3591711White flower58.972
SRR3591712Green floral bud134.637
SRR3591713Yellow flower71.620
SRP173429 SRR8316895Juvenile bud stage 49.011
SRR8316896Juvenile bud stage 102.962
SRR8316897Juvenile bud stage 37.901
SRR8316894Third green stage 35.443
SRR8316900Third green stage 131.913
SRR8316901Third green stage 146.898
SRR8316898Complete white stage 35.330
SRR8316899Complete white stage 78.739
SRR8316903Complete white stage 37.381
SRR8316902Silver flowering stage27.363
SRR8316904Silver flowering stage35.720
SRR8316905Silver flowering stage17.422
SRR8316906Gold flowering stage 54.253
SRR8316907Gold flowering stage 59.478
SRR8316908Gold flowering stage 69.505
SRP132670SRR6706286Control102.303
SRR6706287Light intensity 50%99.706
SRR6706288Light intensity 20%101.123
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1125.603
CNS0095593Slightly white alabastrum(diploid) 2104.649
CNS0095594Slightly white alabastrum(diploid) 3133.282
CNS0095595Whole white alabastrum(diploid) 2129.250
CNS0095596Whole white alabastrum(diploid) 3163.019
CNS0095597Whole white alabastrum(diploid) 4126.246
CNS0095598Silvery flower (diploied) 135.485
CNS0095599Silvery flower (diploied) 235.969
CNS0095600Silvery flower (diploied) 358.868
CNS0095601Golden flower (diploid) 141.423
CNS0095602Golden flower (diploid) 257.889
CNS0095603Golden flower (diploid) 356.018
CNS0095604Slightly white alabastrum(tetraploid) 1193.751
CNS0095605Slightly white alabastrum(tetraploid) 2186.188
CNS0095606Slightly white alabastrum(tetraploid) 375.496
CNS0095607Whole white alabastrum(tetraploid) 1229.427
CNS0095608Whole white alabastrum(tetraploid) 2231.141
CNS0095609Whole white alabastrum(tetraploid) 3218.060
CNS0095610Silvery flower (tetraploid) 186.379
CNS0095611Silvery flower (tetraploid) 263.111
CNS0095612Silvery flower (tetraploid) 367.290
CNS0095613Golden flower (tetraploid) 154.352
CNS0095614Golden flower (tetraploid) 279.709
CNS0095615Golden flower (tetraploid) 355.150
CRA001975CRR073297Stem 164.483
CRR073298Stem 267.412
CRR073299Stem 368.453
CRR073300Leaf 196.292
CRR073301Leaf 298.489
CRR073302Leaf 389.044
CRR073303Juvenile bud 183.812
CRR073304Juvenile bud 288.456
CRR073305Juvenile bud 365.942
CRR073306Third green 168.229
CRR073307Third green 263.075
CRR073308Third green 353.594
CRR073309Second white 148.665
CRR073310Second white 238.445
CRR073311Second white 327.885
CRR073312Silver flowering 133.390
CRR073313Silver flowering 234.487
CRR073314Silver flowering 328.522
CRR073315Gold flowering 126.897
CRR073316Gold flowering 234.584
CRR073317Gold flowering 326.903
CRR073318Tawny withering 160.624
CRR073319Tawny withering 241.280
CRR073320Tawny withering 347.189