Detail information of GWHGAAZE023932


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010063772.11.36734E-42PREDICTED: transmembrane protein 18 [Eucalyptus grandis]
trEMBLtr|A0A059BYM0|A0A059BYM0_EUCGR5E-43Uncharacterized protein {ECO:0000313|EMBL:KCW71036.1}
TAIR10AT1G34350.12E-31Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2974721929747467-
GWHAAZE00000007mRNA2974721929747467-
GWHAAZE00000007exon2974721929747467-
GWHAAZE00000007CDS2974721929747467-
Transcript Sequence

Network for GWHGAAZE023932

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0134
CFinderModule0279


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14770.7TMEM182754.80E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf65.268
SRR3591706second leaf19.793
SRR3591707mature leaf15.892
SRR3591708Shoot apex40.616
SRR3591709Stem52.196
SRR3591710White floral bud44.891
SRR3591711White flower30.076
SRR3591712Green floral bud64.549
SRR3591713Yellow flower28.038
SRP173429 SRR8316895Juvenile bud stage 28.278
SRR8316896Juvenile bud stage 45.377
SRR8316897Juvenile bud stage 26.161
SRR8316894Third green stage 20.437
SRR8316900Third green stage 56.868
SRR8316901Third green stage 65.683
SRR8316898Complete white stage 25.420
SRR8316899Complete white stage 78.686
SRR8316903Complete white stage 37.457
SRR8316902Silver flowering stage23.021
SRR8316904Silver flowering stage23.079
SRR8316905Silver flowering stage10.230
SRR8316906Gold flowering stage 33.677
SRR8316907Gold flowering stage 33.387
SRR8316908Gold flowering stage 45.503
SRP132670SRR6706286Control35.855
SRR6706287Light intensity 50%35.132
SRR6706288Light intensity 20%41.809
CNP0000432CNS0095592Slightly white alabastrum(diploid) 153.139
CNS0095593Slightly white alabastrum(diploid) 266.564
CNS0095594Slightly white alabastrum(diploid) 354.632
CNS0095595Whole white alabastrum(diploid) 263.324
CNS0095596Whole white alabastrum(diploid) 368.956
CNS0095597Whole white alabastrum(diploid) 459.549
CNS0095598Silvery flower (diploied) 127.602
CNS0095599Silvery flower (diploied) 222.858
CNS0095600Silvery flower (diploied) 337.727
CNS0095601Golden flower (diploid) 120.473
CNS0095602Golden flower (diploid) 227.611
CNS0095603Golden flower (diploid) 328.016
CNS0095604Slightly white alabastrum(tetraploid) 168.907
CNS0095605Slightly white alabastrum(tetraploid) 282.227
CNS0095606Slightly white alabastrum(tetraploid) 360.849
CNS0095607Whole white alabastrum(tetraploid) 182.322
CNS0095608Whole white alabastrum(tetraploid) 298.860
CNS0095609Whole white alabastrum(tetraploid) 365.481
CNS0095610Silvery flower (tetraploid) 140.384
CNS0095611Silvery flower (tetraploid) 232.014
CNS0095612Silvery flower (tetraploid) 347.765
CNS0095613Golden flower (tetraploid) 134.157
CNS0095614Golden flower (tetraploid) 236.843
CNS0095615Golden flower (tetraploid) 325.799
CRA001975CRR073297Stem 133.364
CRR073298Stem 228.269
CRR073299Stem 335.931
CRR073300Leaf 138.850
CRR073301Leaf 243.466
CRR073302Leaf 348.199
CRR073303Juvenile bud 150.569
CRR073304Juvenile bud 243.311
CRR073305Juvenile bud 328.750
CRR073306Third green 120.518
CRR073307Third green 230.353
CRR073308Third green 322.540
CRR073309Second white 120.214
CRR073310Second white 220.940
CRR073311Second white 312.437
CRR073312Silver flowering 110.329
CRR073313Silver flowering 214.510
CRR073314Silver flowering 312.113
CRR073315Gold flowering 119.323
CRR073316Gold flowering 226.552
CRR073317Gold flowering 312.092
CRR073318Tawny withering 152.891
CRR073319Tawny withering 239.850
CRR073320Tawny withering 356.207