Detail information of GWHGAAZE024069


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011027511.10PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Populus euphratica]
COGYP_007045970.18E-144delta-aminolevulinic acid dehydratase
Swissprottr|Q9SFH9|HEM21_ARATH0Delta-aminolevulinic acid dehydratase 1, chloroplastic (Precursor)
trEMBLtr|B9RJ27|B9RJ27_RICCO0Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}
TAIR10AT1G69740.20Aldolase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3424498334254151-
GWHAAZE00000007mRNA3424498334254151-
GWHAAZE00000007exon3424498334245150-
GWHAAZE00000007exon3424604134246118-
GWHAAZE00000007exon3424621734246298-
GWHAAZE00000007exon3424638334246454-
GWHAAZE00000007exon3424684834246969-
GWHAAZE00000007exon3424844534248500-
GWHAAZE00000007exon3424996434250033-
GWHAAZE00000007exon3425056234250645-
GWHAAZE00000007exon3425070934250777-
GWHAAZE00000007exon3425160534251678-
GWHAAZE00000007exon3425202334252134-
GWHAAZE00000007exon3425402334254151-
GWHAAZE00000007CDS3425402334254151-
GWHAAZE00000007CDS3425202334252134-
GWHAAZE00000007CDS3425160534251678-
GWHAAZE00000007CDS3425070934250777-
GWHAAZE00000007CDS3425056234250645-
GWHAAZE00000007CDS3424996434250033-
GWHAAZE00000007CDS3424844534248500-
GWHAAZE00000007CDS3424684834246969-
GWHAAZE00000007CDS3424638334246454-
GWHAAZE00000007CDS3424621734246298-
GWHAAZE00000007CDS3424604134246118-
GWHAAZE00000007CDS3424498334245150-
Transcript Sequence

Network for GWHGAAZE024069

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00490.22ALAD473641.80E-133
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01698hemB, ALAD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Porphyrin and chlorophyll metabolismmap00860

Gene Ontology

GO term OntologyName
GO:0033014biological_processtetrapyrrole biosynthetic process
GO:0004655molecular_functionporphobilinogen synthase activity
GO:0046872molecular_functionmetal ion binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf277.884
SRR3591706second leaf461.142
SRR3591707mature leaf250.261
SRR3591708Shoot apex370.393
SRR3591709Stem140.532
SRR3591710White floral bud79.590
SRR3591711White flower89.175
SRR3591712Green floral bud88.814
SRR3591713Yellow flower128.697
SRP173429 SRR8316895Juvenile bud stage 72.059
SRR8316896Juvenile bud stage 74.660
SRR8316897Juvenile bud stage 49.638
SRR8316894Third green stage 34.856
SRR8316900Third green stage 90.331
SRR8316901Third green stage 68.514
SRR8316898Complete white stage 29.670
SRR8316899Complete white stage 84.434
SRR8316903Complete white stage 53.687
SRR8316902Silver flowering stage27.427
SRR8316904Silver flowering stage36.940
SRR8316905Silver flowering stage22.799
SRR8316906Gold flowering stage 70.057
SRR8316907Gold flowering stage 61.766
SRR8316908Gold flowering stage 70.542
SRP132670SRR6706286Control99.363
SRR6706287Light intensity 50%87.672
SRR6706288Light intensity 20%96.120
CNP0000432CNS0095592Slightly white alabastrum(diploid) 168.222
CNS0095593Slightly white alabastrum(diploid) 270.711
CNS0095594Slightly white alabastrum(diploid) 359.677
CNS0095595Whole white alabastrum(diploid) 254.270
CNS0095596Whole white alabastrum(diploid) 355.147
CNS0095597Whole white alabastrum(diploid) 447.116
CNS0095598Silvery flower (diploied) 1144.735
CNS0095599Silvery flower (diploied) 2145.748
CNS0095600Silvery flower (diploied) 3111.665
CNS0095601Golden flower (diploid) 1145.868
CNS0095602Golden flower (diploid) 2126.109
CNS0095603Golden flower (diploid) 3117.257
CNS0095604Slightly white alabastrum(tetraploid) 179.023
CNS0095605Slightly white alabastrum(tetraploid) 272.774
CNS0095606Slightly white alabastrum(tetraploid) 3132.835
CNS0095607Whole white alabastrum(tetraploid) 147.455
CNS0095608Whole white alabastrum(tetraploid) 248.029
CNS0095609Whole white alabastrum(tetraploid) 3100.254
CNS0095610Silvery flower (tetraploid) 1107.804
CNS0095611Silvery flower (tetraploid) 2144.185
CNS0095612Silvery flower (tetraploid) 3141.157
CNS0095613Golden flower (tetraploid) 1120.724
CNS0095614Golden flower (tetraploid) 2138.081
CNS0095615Golden flower (tetraploid) 3168.318
CRA001975CRR073297Stem 1181.990
CRR073298Stem 2153.498
CRR073299Stem 3177.469
CRR073300Leaf 1129.308
CRR073301Leaf 2129.762
CRR073302Leaf 3127.966
CRR073303Juvenile bud 1123.766
CRR073304Juvenile bud 287.348
CRR073305Juvenile bud 3111.895
CRR073306Third green 179.253
CRR073307Third green 265.847
CRR073308Third green 364.577
CRR073309Second white 179.490
CRR073310Second white 289.566
CRR073311Second white 3100.105
CRR073312Silver flowering 1100.234
CRR073313Silver flowering 282.757
CRR073314Silver flowering 399.020
CRR073315Gold flowering 1300.453
CRR073316Gold flowering 2382.315
CRR073317Gold flowering 3235.499
CRR073318Tawny withering 1128.321
CRR073319Tawny withering 2147.287
CRR073320Tawny withering 3127.836