Detail information of GWHGAAZE024076


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFK34613.19.27322E-15unknown [Medicago truncatula]
Swissprottr|Q42592|APXS_ARATH0.000000001L-ascorbate peroxidase S, chloroplastic/mitochondrial (Precursor)
trEMBLtr|I3S2X1|I3S2X1_MEDTR3E-15Uncharacterized protein {ECO:0000313|EMBL:AFK34613.1}
TAIR10AT4G08390.40.000000007stromal ascorbate peroxidase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3436149934362299-
GWHAAZE00000007mRNA3436149934362299-
GWHAAZE00000007exon3436149934361558-
GWHAAZE00000007exon3436166534361897-
GWHAAZE00000007exon3436201434362299-
GWHAAZE00000007CDS3436201434362299-
GWHAAZE00000007CDS3436166534361897-
GWHAAZE00000007CDS3436149934361558-
Transcript Sequence

Network for GWHGAAZE024076

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00434E1.11.1.11 Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf67.606
SRR3591706second leaf58.711
SRR3591707mature leaf32.533
SRR3591708Shoot apex86.088
SRR3591709Stem42.658
SRR3591710White floral bud51.883
SRR3591711White flower53.815
SRR3591712Green floral bud87.506
SRR3591713Yellow flower62.915
SRP173429 SRR8316895Juvenile bud stage 38.210
SRR8316896Juvenile bud stage 53.059
SRR8316897Juvenile bud stage 37.505
SRR8316894Third green stage 31.139
SRR8316900Third green stage 93.620
SRR8316901Third green stage 74.123
SRR8316898Complete white stage 23.053
SRR8316899Complete white stage 58.400
SRR8316903Complete white stage 40.905
SRR8316902Silver flowering stage21.351
SRR8316904Silver flowering stage23.335
SRR8316905Silver flowering stage12.617
SRR8316906Gold flowering stage 38.015
SRR8316907Gold flowering stage 36.549
SRR8316908Gold flowering stage 43.597
SRP132670SRR6706286Control77.212
SRR6706287Light intensity 50%82.545
SRR6706288Light intensity 20%90.197
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.649
CNS0095593Slightly white alabastrum(diploid) 230.172
CNS0095594Slightly white alabastrum(diploid) 325.316
CNS0095595Whole white alabastrum(diploid) 231.857
CNS0095596Whole white alabastrum(diploid) 338.440
CNS0095597Whole white alabastrum(diploid) 436.536
CNS0095598Silvery flower (diploied) 126.294
CNS0095599Silvery flower (diploied) 224.352
CNS0095600Silvery flower (diploied) 349.265
CNS0095601Golden flower (diploid) 117.452
CNS0095602Golden flower (diploid) 241.429
CNS0095603Golden flower (diploid) 343.880
CNS0095604Slightly white alabastrum(tetraploid) 145.716
CNS0095605Slightly white alabastrum(tetraploid) 242.837
CNS0095606Slightly white alabastrum(tetraploid) 354.091
CNS0095607Whole white alabastrum(tetraploid) 143.589
CNS0095608Whole white alabastrum(tetraploid) 232.953
CNS0095609Whole white alabastrum(tetraploid) 357.089
CNS0095610Silvery flower (tetraploid) 136.993
CNS0095611Silvery flower (tetraploid) 245.563
CNS0095612Silvery flower (tetraploid) 333.182
CNS0095613Golden flower (tetraploid) 116.689
CNS0095614Golden flower (tetraploid) 240.261
CNS0095615Golden flower (tetraploid) 325.722
CRA001975CRR073297Stem 151.944
CRR073298Stem 251.243
CRR073299Stem 350.347
CRR073300Leaf 165.071
CRR073301Leaf 253.072
CRR073302Leaf 364.010
CRR073303Juvenile bud 147.081
CRR073304Juvenile bud 246.496
CRR073305Juvenile bud 352.081
CRR073306Third green 124.437
CRR073307Third green 223.538
CRR073308Third green 319.761
CRR073309Second white 125.187
CRR073310Second white 220.287
CRR073311Second white 316.125
CRR073312Silver flowering 119.167
CRR073313Silver flowering 226.516
CRR073314Silver flowering 321.583
CRR073315Gold flowering 135.985
CRR073316Gold flowering 243.698
CRR073317Gold flowering 325.239
CRR073318Tawny withering 132.679
CRR073319Tawny withering 224.095
CRR073320Tawny withering 330.526