Gene detail

Detail information of GWHGAAZE024191

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KEH25831.1	0	cytochrome P450 family protein [Medicago truncatula]
COG	YP_007146684.1	2E-56	cytochrome P450
Swissprot	tr\|Q9FH76\|ABAH3_ARATH	2E-91	Abscisic acid 8'-hydroxylase 3
trEMBL	tr\|A0A072U8X2\|A0A072U8X2_MEDTR	0	Cytochrome P450 family protein {ECO:0000313\|EMBL:KEH25831.1}
TAIR10	AT5G45340.2	2E-74	cytochrome P450, family 707, subfamily A, polypeptide 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	37120679	37126620	-
GWHAAZE00000007	mRNA	37120679	37126620	-
GWHAAZE00000007	exon	37120679	37120706	-
GWHAAZE00000007	exon	37120998	37121116	-
GWHAAZE00000007	exon	37121204	37121310	-
GWHAAZE00000007	exon	37121911	37121989	-
GWHAAZE00000007	exon	37122084	37122170	-
GWHAAZE00000007	exon	37123377	37123498	-
GWHAAZE00000007	exon	37123595	37123649	-
GWHAAZE00000007	exon	37124467	37124619	-
GWHAAZE00000007	exon	37124790	37125108	-
GWHAAZE00000007	exon	37126400	37126620	-
GWHAAZE00000007	CDS	37126400	37126620	-
GWHAAZE00000007	CDS	37124790	37125108	-
GWHAAZE00000007	CDS	37124467	37124619	-
GWHAAZE00000007	CDS	37123595	37123649	-
GWHAAZE00000007	CDS	37123377	37123498	-
GWHAAZE00000007	CDS	37122084	37122170	-
GWHAAZE00000007	CDS	37121911	37121989	-
GWHAAZE00000007	CDS	37121204	37121310	-
GWHAAZE00000007	CDS	37120998	37121116	-
GWHAAZE00000007	CDS	37120679	37120706	-

Transcript Sequence
>GWHTAAZE024225 ATGGAGCTAATAACCGTTGTGTTACTGCTTGTGGCATTTGCATCGGTTCTCGCGGTTCTTGTGGCATCCGTCTTCTTGCAACATGCAAGGGTTTCACCGAAAGAAATGGAGGGAATTCCAGGTAGCTTGGGTTGGCCTATTGTAGGGGAAAGTTTTTCCATCATTTCCGAGTTTTCGAGTCCAGCGGGTATATTCAGCTTCATGAACAAGAGGCAACAAAGGTACGGAAAGGTATTCAAGAGCTATGTGTTGGGGAGATTTACCGTTTTCATGACCGGGAGAGAAGCAAGCAAGATTCTATTAACGGGCAAAGACGGGATTGTGAGCTTGAACCTCTTCTACACCGGTCAGCAGGTGCTGGGGCCCACCAGCTTGCTCCAACAGACCGGAGAAGAACACAAGCGGCTTCGACGCCTTATTGCTGAACCCCTCTCCATTGAAGGCCTGAAAAAATACTTCCATTTCATTAATAATTTGGCCATTGAGACGTTAGATCAATGGACTGGACAAAAAGTTTCGGTTCTTGAAGAGGCTTCTACATTTACGCTTAAGGTGATAGGAAGCATGATGATTAGCTTAGAGCCTTCTGGTGAGGAGCAAGAGAAATTTAGAGACAATTTCAAGCTCATTTCATCATCATTTGCATCTTTACCATTTAAGATTCCGGGAACTGCTTTTCATAACGGTATCAAGGCTCGTGATAGGATGTATGCGATGTTAGACTCTATAATTTCTGACCGAAGAAATGACAGACAATTGAAGGACAATATACTAACCTTGCTGGTTGCGGGTCACGATACAACAACAGCTGCTCTCACATGGCTCATCAAATTTCTAGAAGAAAATCCTCCCGTCTTGGACCGTCTCAGGGAGGAACACATGGAAATTCGAGAAAACAGAAAGGACGGATCAAGTCTCACATGGTCGGAAGTCATGAACATGCCTTACACCACCAAAGTAATCAGTGAAACTCTTCGCAGAGCCACAATCTTACCTTGGTTTTCAAGAAAAGCTGCACAGGATTTTGAAATTGATGGATATAAAATCAAGAAAGGCTGGTCTATTAACTTGGACGTAGTTTCAATTCACCATGACCCAAAAGTTTTCGTTGATCCTCATAAGTTTGATCCTTCTAGATTTGATGAGCACGTAAAGCCTTTCAACTTCCTTGGGTTTGGAAATGGACCACGTATGTGCCCTGGAATGAACTTGGCCAAGGTCGAAATTTGTGTTTTCATTCATCACCTTGTCTGCAGATACAAGATGAACTGGAATACAATCGATAAATAA

Network for GWHGAAZE024191

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	40	248	3.30E-11
PF00067.23	p450	239	423	2.90E-55

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	molecular_function	iron ion binding
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.290
	SRR3591706	second leaf	1.149
	SRR3591707	mature leaf	2.486
	SRR3591708	Shoot apex	5.280
	SRR3591709	Stem	2.988
	SRR3591710	White floral bud	1.983
	SRR3591711	White flower	1.581
	SRR3591712	Green floral bud	1.619
	SRR3591713	Yellow flower	1.812
SRP173429	SRR8316895	Juvenile bud stage	3.225
	SRR8316896	Juvenile bud stage	2.463
	SRR8316897	Juvenile bud stage	1.027
	SRR8316894	Third green stage	1.440
	SRR8316900	Third green stage	2.614
	SRR8316901	Third green stage	2.789
	SRR8316898	Complete white stage	0.485
	SRR8316899	Complete white stage	5.182
	SRR8316903	Complete white stage	0.865
	SRR8316902	Silver flowering stage	0.377
	SRR8316904	Silver flowering stage	0.260
	SRR8316905	Silver flowering stage	0.233
	SRR8316906	Gold flowering stage	0.806
	SRR8316907	Gold flowering stage	0.810
	SRR8316908	Gold flowering stage	0.732
SRP132670	SRR6706286	Control	1.914
	SRR6706287	Light intensity 50%	2.420
	SRR6706288	Light intensity 20%	2.705
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.319
	CNS0095593	Slightly white alabastrum(diploid) 2	2.311
	CNS0095594	Slightly white alabastrum(diploid) 3	2.492
	CNS0095595	Whole white alabastrum(diploid) 2	2.287
	CNS0095596	Whole white alabastrum(diploid) 3	1.529
	CNS0095597	Whole white alabastrum(diploid) 4	1.159
	CNS0095598	Silvery flower (diploied) 1	6.705
	CNS0095599	Silvery flower (diploied) 2	3.680
	CNS0095600	Silvery flower (diploied) 3	2.876
	CNS0095601	Golden flower (diploid) 1	5.994
	CNS0095602	Golden flower (diploid) 2	4.363
	CNS0095603	Golden flower (diploid) 3	3.254
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.357
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.226
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.563
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.680
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.319
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.715
	CNS0095610	Silvery flower (tetraploid) 1	0.663
	CNS0095611	Silvery flower (tetraploid) 2	0.576
	CNS0095612	Silvery flower (tetraploid) 3	0.298
	CNS0095613	Golden flower (tetraploid) 1	0.522
	CNS0095614	Golden flower (tetraploid) 2	0.269
	CNS0095615	Golden flower (tetraploid) 3	0.224
CRA001975	CRR073297	Stem 1	1.528
	CRR073298	Stem 2	1.706
	CRR073299	Stem 3	1.947
	CRR073300	Leaf 1	1.162
	CRR073301	Leaf 2	1.547
	CRR073302	Leaf 3	1.024
	CRR073303	Juvenile bud 1	1.272
	CRR073304	Juvenile bud 2	1.124
	CRR073305	Juvenile bud 3	1.427
	CRR073306	Third green 1	0.082
	CRR073307	Third green 2	0.031
	CRR073308	Third green 3	0.065
	CRR073309	Second white 1	0.063
	CRR073310	Second white 2	0.296
	CRR073311	Second white 3	0.534
	CRR073312	Silver flowering 1	0.318
	CRR073313	Silver flowering 2	0.197
	CRR073314	Silver flowering 3	0.018
	CRR073315	Gold flowering 1	0.229
	CRR073316	Gold flowering 2	1.000
	CRR073317	Gold flowering 3	0.281
	CRR073318	Tawny withering 1	2.176
	CRR073319	Tawny withering 2	2.415
	CRR073320	Tawny withering 3	1.839