Detail information of GWHGAAZE024261


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011074131.10PREDICTED: protein FEZ-like [Sesamum indicum]
Swissprottr|Q84K00|NAC78_ARATH1E-70NAC domain-containing protein 78
trEMBLtr|D7TFR5|D7TFR5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI29338.3}
TAIR10AT1G34190.13E-111NAC domain containing protein 17

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3874857638751612+
GWHAAZE00000007mRNA3874857638751612+
GWHAAZE00000007exon3874857638748944+
GWHAAZE00000007exon3874981238750647+
GWHAAZE00000007exon3875073138750950+
GWHAAZE00000007exon3875126338751612+
GWHAAZE00000007five_prime_UTR3874857638748757+
GWHAAZE00000007CDS3874875838748944+
GWHAAZE00000007CDS3874981238750647+
GWHAAZE00000007CDS3875073138750950+
GWHAAZE00000007CDS3875126338751612+
Transcript Sequence

Network for GWHGAAZE024261

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.16NAM171433.60E-36
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE024261.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30102030405060708090100110120Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf55.378
SRR3591706second leaf30.463
SRR3591707mature leaf40.904
SRR3591708Shoot apex46.742
SRR3591709Stem71.008
SRR3591710White floral bud42.129
SRR3591711White flower70.361
SRR3591712Green floral bud39.983
SRR3591713Yellow flower67.127
SRP173429 SRR8316895Juvenile bud stage 47.710
SRR8316896Juvenile bud stage 74.806
SRR8316897Juvenile bud stage 23.875
SRR8316894Third green stage 21.258
SRR8316900Third green stage 52.286
SRR8316901Third green stage 54.348
SRR8316898Complete white stage 18.301
SRR8316899Complete white stage 87.582
SRR8316903Complete white stage 28.848
SRR8316902Silver flowering stage30.189
SRR8316904Silver flowering stage34.088
SRR8316905Silver flowering stage20.117
SRR8316906Gold flowering stage 93.050
SRR8316907Gold flowering stage 76.953
SRR8316908Gold flowering stage 85.989
SRP132670SRR6706286Control55.083
SRR6706287Light intensity 50%53.617
SRR6706288Light intensity 20%53.847
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.594
CNS0095593Slightly white alabastrum(diploid) 239.050
CNS0095594Slightly white alabastrum(diploid) 331.574
CNS0095595Whole white alabastrum(diploid) 226.008
CNS0095596Whole white alabastrum(diploid) 321.895
CNS0095597Whole white alabastrum(diploid) 425.207
CNS0095598Silvery flower (diploied) 159.909
CNS0095599Silvery flower (diploied) 257.852
CNS0095600Silvery flower (diploied) 382.664
CNS0095601Golden flower (diploid) 184.352
CNS0095602Golden flower (diploid) 2108.877
CNS0095603Golden flower (diploid) 3103.571
CNS0095604Slightly white alabastrum(tetraploid) 123.692
CNS0095605Slightly white alabastrum(tetraploid) 218.931
CNS0095606Slightly white alabastrum(tetraploid) 347.322
CNS0095607Whole white alabastrum(tetraploid) 117.676
CNS0095608Whole white alabastrum(tetraploid) 211.016
CNS0095609Whole white alabastrum(tetraploid) 326.319
CNS0095610Silvery flower (tetraploid) 162.387
CNS0095611Silvery flower (tetraploid) 266.378
CNS0095612Silvery flower (tetraploid) 329.622
CNS0095613Golden flower (tetraploid) 157.595
CNS0095614Golden flower (tetraploid) 271.750
CNS0095615Golden flower (tetraploid) 370.562
CRA001975CRR073297Stem 150.465
CRR073298Stem 245.294
CRR073299Stem 345.573
CRR073300Leaf 151.346
CRR073301Leaf 251.961
CRR073302Leaf 345.090
CRR073303Juvenile bud 141.391
CRR073304Juvenile bud 234.805
CRR073305Juvenile bud 359.240
CRR073306Third green 113.477
CRR073307Third green 212.909
CRR073308Third green 315.874
CRR073309Second white 120.394
CRR073310Second white 218.102
CRR073311Second white 320.037
CRR073312Silver flowering 133.830
CRR073313Silver flowering 227.740
CRR073314Silver flowering 326.160
CRR073315Gold flowering 140.699
CRR073316Gold flowering 252.067
CRR073317Gold flowering 344.612
CRR073318Tawny withering 148.760
CRR073319Tawny withering 245.147
CRR073320Tawny withering 348.310