Detail information of GWHGAAZE024331


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP45470.10hypothetical protein JCGZ_09719 [Jatropha curcas]
COGYP_419957.11E-80hypothetical protein amb0594
trEMBLtr|A0A067LL51|A0A067LL51_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP45470.1}
TAIR10AT3G28700.10Protein of unknown function (DUF185)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4014862140154944-
GWHAAZE00000007mRNA4014862140154944-
GWHAAZE00000007exon4014862140148883-
GWHAAZE00000007exon4014925440149362-
GWHAAZE00000007exon4015029140150674-
GWHAAZE00000007exon4015327940153337-
GWHAAZE00000007exon4015373040153931-
GWHAAZE00000007exon4015407440154184-
GWHAAZE00000007exon4015442240154565-
GWHAAZE00000007exon4015488540154944-
GWHAAZE00000007CDS4015488540154944-
GWHAAZE00000007CDS4015442240154565-
GWHAAZE00000007CDS4015407440154184-
GWHAAZE00000007CDS4015373040153931-
GWHAAZE00000007CDS4015327940153337-
GWHAAZE00000007CDS4015029140150674-
GWHAAZE00000007CDS4014925440149362-
GWHAAZE00000007CDS4014862140148883-
Transcript Sequence

Network for GWHGAAZE024331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02636.18Methyltransf_28693653.30E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18164NDUFAF7 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.871
SRR3591706second leaf6.519
SRR3591707mature leaf4.334
SRR3591708Shoot apex14.347
SRR3591709Stem6.677
SRR3591710White floral bud5.903
SRR3591711White flower5.946
SRR3591712Green floral bud12.315
SRR3591713Yellow flower3.941
SRP173429 SRR8316895Juvenile bud stage 10.993
SRR8316896Juvenile bud stage 14.919
SRR8316897Juvenile bud stage 5.839
SRR8316894Third green stage 6.674
SRR8316900Third green stage 23.515
SRR8316901Third green stage 20.269
SRR8316898Complete white stage 7.640
SRR8316899Complete white stage 19.294
SRR8316903Complete white stage 8.200
SRR8316902Silver flowering stage6.466
SRR8316904Silver flowering stage5.549
SRR8316905Silver flowering stage3.481
SRR8316906Gold flowering stage 15.415
SRR8316907Gold flowering stage 15.416
SRR8316908Gold flowering stage 13.514
SRP132670SRR6706286Control18.608
SRR6706287Light intensity 50%18.536
SRR6706288Light intensity 20%22.874
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.722
CNS0095593Slightly white alabastrum(diploid) 211.026
CNS0095594Slightly white alabastrum(diploid) 39.124
CNS0095595Whole white alabastrum(diploid) 28.167
CNS0095596Whole white alabastrum(diploid) 39.231
CNS0095597Whole white alabastrum(diploid) 48.571
CNS0095598Silvery flower (diploied) 16.295
CNS0095599Silvery flower (diploied) 26.205
CNS0095600Silvery flower (diploied) 311.920
CNS0095601Golden flower (diploid) 17.900
CNS0095602Golden flower (diploid) 29.094
CNS0095603Golden flower (diploid) 311.103
CNS0095604Slightly white alabastrum(tetraploid) 112.583
CNS0095605Slightly white alabastrum(tetraploid) 211.008
CNS0095606Slightly white alabastrum(tetraploid) 316.993
CNS0095607Whole white alabastrum(tetraploid) 18.760
CNS0095608Whole white alabastrum(tetraploid) 27.221
CNS0095609Whole white alabastrum(tetraploid) 318.751
CNS0095610Silvery flower (tetraploid) 19.895
CNS0095611Silvery flower (tetraploid) 212.923
CNS0095612Silvery flower (tetraploid) 313.734
CNS0095613Golden flower (tetraploid) 14.938
CNS0095614Golden flower (tetraploid) 28.547
CNS0095615Golden flower (tetraploid) 34.918
CRA001975CRR073297Stem 115.087
CRR073298Stem 215.931
CRR073299Stem 316.537
CRR073300Leaf 118.442
CRR073301Leaf 218.419
CRR073302Leaf 321.126
CRR073303Juvenile bud 122.475
CRR073304Juvenile bud 224.564
CRR073305Juvenile bud 314.267
CRR073306Third green 118.459
CRR073307Third green 212.054
CRR073308Third green 310.797
CRR073309Second white 121.509
CRR073310Second white 216.014
CRR073311Second white 38.684
CRR073312Silver flowering 110.141
CRR073313Silver flowering 213.457
CRR073314Silver flowering 310.485
CRR073315Gold flowering 119.935
CRR073316Gold flowering 223.438
CRR073317Gold flowering 315.738
CRR073318Tawny withering 113.063
CRR073319Tawny withering 211.823
CRR073320Tawny withering 311.529