Gene detail

Detail information of GWHGAAZE024572

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU25317.1	0	hypothetical protein MIMGU_mgv1a000893mg [Erythranthe guttata]
COG	NP_617732.1	4E-60	H(+)-transporting ATPase
Swissprot	tr\|Q42556\|PMA9_ARATH	0	ATPase 9, plasma membrane-type
trEMBL	tr\|A0A022Q9E2\|A0A022Q9E2_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU25317.1}
TAIR10	AT1G80660.2	6E-149	H(+)-ATPase 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	45322835	45326549	-
GWHAAZE00000007	mRNA	45322835	45326549	-
GWHAAZE00000007	exon	45326016	45326549	-
GWHAAZE00000007	exon	45324961	45325134	-
GWHAAZE00000007	exon	45324588	45324770	-
GWHAAZE00000007	exon	45323682	45323863	-
GWHAAZE00000007	exon	45322835	45322974	-
GWHAAZE00000007	CDS	45326016	45326549	-
GWHAAZE00000007	CDS	45324961	45325134	-
GWHAAZE00000007	CDS	45324588	45324770	-
GWHAAZE00000007	CDS	45323682	45323863	-
GWHAAZE00000007	CDS	45322962	45322974	-
GWHAAZE00000007	three_prime_UTR	45322835	45322961	-

Transcript Sequence
>GWHTAAZE024606 ATGTTTCGGGTCCTCACAGAGCACAAGTATGAGATTGTGAAGAAGCTGCAAGAGAGGAAGCACATTGTTGGAATGACTGGAGATGGAGTGAACGATGCACCAGCTCTTAAACGGGCCGACATTGGTATCGCCGTGGCTGATGCAACTGACGCAGCTAGAAGTGCATCCGACATTGTTCTAACCGAACCTGGACTGAGTGTGATTGTGTGTGCCGTTTTAACGAGCAGAGCCATCTTTCAAAGGATGAAGAACTACACAATCTACGCTGTTTCAATCACGATCCGCATTGTGATGGGCTTCATGCTCATTGCTCTCATTTGGAAGTTTGACTTCTCGCCCTTTATGGTTCTCATCATTGCCATCCTCAATGATGGAACCATCATGACCATATCTAAAGACAGGGTGAAGCCATCTCCCGTACCCGACTCTTGGAAGCTCAACGAGATCTTTGCCACTGGCGTCGTCCTCGGAACTTACCTTGCTCTCGTCACTTGTCTCTTCTTTTGGCTAGCAGCCGACACCAACTTTTTCTCCAACACTTTTGGTGTTCGACCGATTAAGGCTAATCCAGCTGAGCTTAATTCAGCTCTTTACCTCCAAGTGAGCATTGTAAGTCAAGCACTCATCTTCGTTACCAGGTCCCGTAGCTGGTCATTCGTTGAACCACCCGGCATCTTGCTGGTCACTGCCTTCATTCTAGCCCAATTGTTGGCTACTGTCATTACGGTGTATGCAAGTTGGAGCTTTGCCAGGATCCAAGGCATTGGGTGGGGATGGGGTGGAGTGATCTGGATTTTCAGCATCGTTACCTACTTCCCCCTAGATGTCCTTAAGTTCCTCATTCGCTACGCACTGGGTGGTCATGCTTGGGATTCTGTGATTGAAAACAAGACCGCTTTCACTACTAAAAAGGATTATGGCAAGGGGGAGAGAGAGGCACAATGGGCGACAGCTCAACGTACACTCCACGGCCTTCAACCTGTTGATAATTCATCTCTCTTGGAGAACAAGAACTACCGAGAGTTGTCTGAGATTGCCGAGCAGGCTAAGAAAAGAGCTGAAGTTGCAGCAAAGTACGGAGTTTAAGGCTTTAAGAGAACTACAAAAATGTGGCCGCTTGAATCACTCGTCAAGCTGAAGGGATTGGACATTGAAGCCCTCCAACAACGGCACTAACCAAGGGTGAAACAAAAATGTATACTAGTGGTGGAAG

Network for GWHGAAZE024572

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00702.27	Hydrolase	4	40	1.40E-06

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01535	PMA1, PMA2	Metabolic pathways	map01100
K01535	PMA1, PMA2	Oxidative phosphorylation	map00190

Gene Ontology

GO term	Ontology	Name
GO:0016021	cellular_component	integral component of membrane

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.424
	SRR3591706	second leaf	0.113
	SRR3591707	mature leaf	0.098
	SRR3591708	Shoot apex	0.604
	SRR3591709	Stem	1.015
	SRR3591710	White floral bud	246.586
	SRR3591711	White flower	13.538
	SRR3591712	Green floral bud	126.981
	SRR3591713	Yellow flower	8.408
SRP173429	SRR8316895	Juvenile bud stage	0.712
	SRR8316896	Juvenile bud stage	16.017
	SRR8316897	Juvenile bud stage	13.997
	SRR8316894	Third green stage	12.119
	SRR8316900	Third green stage	64.447
	SRR8316901	Third green stage	69.320
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.926
	SRR8316903	Complete white stage	0.265
	SRR8316902	Silver flowering stage	2.682
	SRR8316904	Silver flowering stage	4.723
	SRR8316905	Silver flowering stage	1.845
	SRR8316906	Gold flowering stage	1.301
	SRR8316907	Gold flowering stage	1.116
	SRR8316908	Gold flowering stage	0.693
SRP132670	SRR6706286	Control	50.328
	SRR6706287	Light intensity 50%	52.652
	SRR6706288	Light intensity 20%	43.027
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	92.955
	CNS0095593	Slightly white alabastrum(diploid) 2	64.774
	CNS0095594	Slightly white alabastrum(diploid) 3	95.877
	CNS0095595	Whole white alabastrum(diploid) 2	216.366
	CNS0095596	Whole white alabastrum(diploid) 3	255.252
	CNS0095597	Whole white alabastrum(diploid) 4	323.008
	CNS0095598	Silvery flower (diploied) 1	14.460
	CNS0095599	Silvery flower (diploied) 2	45.732
	CNS0095600	Silvery flower (diploied) 3	9.237
	CNS0095601	Golden flower (diploid) 1	17.028
	CNS0095602	Golden flower (diploid) 2	8.553
	CNS0095603	Golden flower (diploid) 3	6.091
	CNS0095604	Slightly white alabastrum(tetraploid) 1	146.048
	CNS0095605	Slightly white alabastrum(tetraploid) 2	155.223
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.166
	CNS0095607	Whole white alabastrum(tetraploid) 1	352.159
	CNS0095608	Whole white alabastrum(tetraploid) 2	448.046
	CNS0095609	Whole white alabastrum(tetraploid) 3	149.333
	CNS0095610	Silvery flower (tetraploid) 1	6.250
	CNS0095611	Silvery flower (tetraploid) 2	26.884
	CNS0095612	Silvery flower (tetraploid) 3	64.123
	CNS0095613	Golden flower (tetraploid) 1	14.205
	CNS0095614	Golden flower (tetraploid) 2	2.597
	CNS0095615	Golden flower (tetraploid) 3	27.537
CRA001975	CRR073297	Stem 1	16.559
	CRR073298	Stem 2	19.860
	CRR073299	Stem 3	7.975
	CRR073300	Leaf 1	126.628
	CRR073301	Leaf 2	78.471
	CRR073302	Leaf 3	34.792
	CRR073303	Juvenile bud 1	117.422
	CRR073304	Juvenile bud 2	77.528
	CRR073305	Juvenile bud 3	13.840
	CRR073306	Third green 1	53.084
	CRR073307	Third green 2	56.468
	CRR073308	Third green 3	57.139
	CRR073309	Second white 1	1.686
	CRR073310	Second white 2	14.388
	CRR073311	Second white 3	15.961
	CRR073312	Silver flowering 1	65.041
	CRR073313	Silver flowering 2	59.930
	CRR073314	Silver flowering 3	41.094
	CRR073315	Gold flowering 1	52.336
	CRR073316	Gold flowering 2	15.660
	CRR073317	Gold flowering 3	8.031
	CRR073318	Tawny withering 1	64.985
	CRR073319	Tawny withering 2	59.723
	CRR073320	Tawny withering 3	54.225