Detail information of GWHGAAZE024602


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002276114.10PREDICTED: leucine aminopeptidase 1 [Vitis vinifera]
COGYP_007159418.12E-153cytosol aminopeptidase
Swissprottr|P30184|AMPL1_ARATH0Leucine aminopeptidase 1
trEMBLtr|F6HYJ1|F6HYJ1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59755.1}
TAIR10AT4G30920.10Cytosol aminopeptidase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4593560145943388-
GWHAAZE00000007mRNA4593560145943388-
GWHAAZE00000007exon4593560145935732-
GWHAAZE00000007exon4593690645937154-
GWHAAZE00000007exon4593823345938310-
GWHAAZE00000007exon4593897545939070-
GWHAAZE00000007exon4593924545939371-
GWHAAZE00000007exon4594025245940477-
GWHAAZE00000007exon4594085745941051-
GWHAAZE00000007exon4594164945942069-
GWHAAZE00000007exon4594332345943388-
GWHAAZE00000007CDS4594332345943388-
GWHAAZE00000007CDS4594164945942069-
GWHAAZE00000007CDS4594085745941051-
GWHAAZE00000007CDS4594025245940477-
GWHAAZE00000007CDS4593924545939371-
GWHAAZE00000007CDS4593897545939070-
GWHAAZE00000007CDS4593823345938310-
GWHAAZE00000007CDS4593690645937154-
GWHAAZE00000007CDS4593560145935732-
Transcript Sequence

Network for GWHGAAZE024602

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0254


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02789.18Peptidase_M17_N411776.80E-25
PF00883.22Peptidase_M172145202.30E-114
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01255CARP, pepA Metabolic pathways map01100
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0006508biological_processproteolysis
GO:0019538biological_processprotein metabolic process
GO:0005737cellular_componentcytoplasm
GO:0004177molecular_functionaminopeptidase activity
GO:0008235molecular_functionmetalloexopeptidase activity
GO:0030145molecular_functionmanganese ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf172.245
SRR3591706second leaf109.495
SRR3591707mature leaf113.690
SRR3591708Shoot apex135.385
SRR3591709Stem163.125
SRR3591710White floral bud223.900
SRR3591711White flower219.160
SRR3591712Green floral bud320.121
SRR3591713Yellow flower203.339
SRP173429 SRR8316895Juvenile bud stage 152.716
SRR8316896Juvenile bud stage 216.947
SRR8316897Juvenile bud stage 108.578
SRR8316894Third green stage 87.015
SRR8316900Third green stage 359.400
SRR8316901Third green stage 297.315
SRR8316898Complete white stage 135.090
SRR8316899Complete white stage 419.238
SRR8316903Complete white stage 182.818
SRR8316902Silver flowering stage107.381
SRR8316904Silver flowering stage123.039
SRR8316905Silver flowering stage69.256
SRR8316906Gold flowering stage 220.905
SRR8316907Gold flowering stage 236.694
SRR8316908Gold flowering stage 238.823
SRP132670SRR6706286Control315.115
SRR6706287Light intensity 50%302.598
SRR6706288Light intensity 20%340.783
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1157.223
CNS0095593Slightly white alabastrum(diploid) 2162.897
CNS0095594Slightly white alabastrum(diploid) 3158.599
CNS0095595Whole white alabastrum(diploid) 2171.107
CNS0095596Whole white alabastrum(diploid) 3208.346
CNS0095597Whole white alabastrum(diploid) 4182.695
CNS0095598Silvery flower (diploied) 1215.654
CNS0095599Silvery flower (diploied) 2197.250
CNS0095600Silvery flower (diploied) 3301.709
CNS0095601Golden flower (diploid) 1204.840
CNS0095602Golden flower (diploid) 2288.928
CNS0095603Golden flower (diploid) 3280.941
CNS0095604Slightly white alabastrum(tetraploid) 1211.987
CNS0095605Slightly white alabastrum(tetraploid) 2201.758
CNS0095606Slightly white alabastrum(tetraploid) 3284.804
CNS0095607Whole white alabastrum(tetraploid) 1174.189
CNS0095608Whole white alabastrum(tetraploid) 2170.097
CNS0095609Whole white alabastrum(tetraploid) 3338.527
CNS0095610Silvery flower (tetraploid) 1320.442
CNS0095611Silvery flower (tetraploid) 2388.407
CNS0095612Silvery flower (tetraploid) 3293.498
CNS0095613Golden flower (tetraploid) 1198.528
CNS0095614Golden flower (tetraploid) 2269.849
CNS0095615Golden flower (tetraploid) 3185.689
CRA001975CRR073297Stem 1266.299
CRR073298Stem 2255.749
CRR073299Stem 3298.670
CRR073300Leaf 1348.878
CRR073301Leaf 2341.357
CRR073302Leaf 3387.107
CRR073303Juvenile bud 1518.718
CRR073304Juvenile bud 2432.514
CRR073305Juvenile bud 3570.901
CRR073306Third green 1277.333
CRR073307Third green 2194.052
CRR073308Third green 3201.822
CRR073309Second white 1274.142
CRR073310Second white 2191.523
CRR073311Second white 3166.447
CRR073312Silver flowering 1163.291
CRR073313Silver flowering 2175.965
CRR073314Silver flowering 3173.896
CRR073315Gold flowering 1207.933
CRR073316Gold flowering 2246.806
CRR073317Gold flowering 3223.631
CRR073318Tawny withering 1261.357
CRR073319Tawny withering 2199.208
CRR073320Tawny withering 3278.224