Detail information of GWHGAAZE024758


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002285554.13.22312E-93PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Vitis vinifera]
Swissprottr|Q9LNQ1|TI231_ARATH4E-63Mitochondrial import inner membrane translocase subunit TIM23-1
trEMBLtr|D7SV51|D7SV51_VITVI1E-93Putative uncharacterized protein {ECO:0000313|EMBL:CBI21150.3}
TAIR10AT1G17530.11E-44translocase of inner mitochondrial membrane 23

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4882150548823293-
GWHAAZE00000007mRNA4882150548823293-
GWHAAZE00000007exon4882301348823293-
GWHAAZE00000007exon4882150548822005-
GWHAAZE00000007CDS4882301348823293-
GWHAAZE00000007CDS4882173548822005-
GWHAAZE00000007three_prime_UTR4882150548821734-
Transcript Sequence

Network for GWHGAAZE024758

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02466.20Tim17571656.80E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17794TIM23 Longevity regulating pathway - worm map04212

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.716
SRR3591706second leaf6.720
SRR3591707mature leaf8.586
SRR3591708Shoot apex26.324
SRR3591709Stem13.475
SRR3591710White floral bud10.722
SRR3591711White flower30.668
SRR3591712Green floral bud23.277
SRR3591713Yellow flower12.992
SRP173429 SRR8316895Juvenile bud stage 20.348
SRR8316896Juvenile bud stage 24.809
SRR8316897Juvenile bud stage 8.346
SRR8316894Third green stage 6.200
SRR8316900Third green stage 20.495
SRR8316901Third green stage 20.104
SRR8316898Complete white stage 2.637
SRR8316899Complete white stage 24.599
SRR8316903Complete white stage 3.364
SRR8316902Silver flowering stage5.183
SRR8316904Silver flowering stage3.453
SRR8316905Silver flowering stage1.895
SRR8316906Gold flowering stage 14.951
SRR8316907Gold flowering stage 12.350
SRR8316908Gold flowering stage 18.358
SRP132670SRR6706286Control17.351
SRR6706287Light intensity 50%17.246
SRR6706288Light intensity 20%17.953
CNP0000432CNS0095592Slightly white alabastrum(diploid) 137.645
CNS0095593Slightly white alabastrum(diploid) 243.046
CNS0095594Slightly white alabastrum(diploid) 350.967
CNS0095595Whole white alabastrum(diploid) 234.380
CNS0095596Whole white alabastrum(diploid) 331.465
CNS0095597Whole white alabastrum(diploid) 425.426
CNS0095598Silvery flower (diploied) 126.254
CNS0095599Silvery flower (diploied) 216.614
CNS0095600Silvery flower (diploied) 310.425
CNS0095601Golden flower (diploid) 119.784
CNS0095602Golden flower (diploid) 212.017
CNS0095603Golden flower (diploid) 314.054
CNS0095604Slightly white alabastrum(tetraploid) 133.019
CNS0095605Slightly white alabastrum(tetraploid) 235.659
CNS0095606Slightly white alabastrum(tetraploid) 349.297
CNS0095607Whole white alabastrum(tetraploid) 124.678
CNS0095608Whole white alabastrum(tetraploid) 219.896
CNS0095609Whole white alabastrum(tetraploid) 322.939
CNS0095610Silvery flower (tetraploid) 120.415
CNS0095611Silvery flower (tetraploid) 212.922
CNS0095612Silvery flower (tetraploid) 37.722
CNS0095613Golden flower (tetraploid) 114.926
CNS0095614Golden flower (tetraploid) 216.549
CNS0095615Golden flower (tetraploid) 38.718
CRA001975CRR073297Stem 122.930
CRR073298Stem 224.084
CRR073299Stem 334.308
CRR073300Leaf 120.569
CRR073301Leaf 219.903
CRR073302Leaf 335.426
CRR073303Juvenile bud 124.457
CRR073304Juvenile bud 212.492
CRR073305Juvenile bud 324.032
CRR073306Third green 14.125
CRR073307Third green 24.192
CRR073308Third green 33.010
CRR073309Second white 16.777
CRR073310Second white 211.812
CRR073311Second white 35.203
CRR073312Silver flowering 14.160
CRR073313Silver flowering 27.182
CRR073314Silver flowering 32.719
CRR073315Gold flowering 119.011
CRR073316Gold flowering 219.219
CRR073317Gold flowering 318.837
CRR073318Tawny withering 128.512
CRR073319Tawny withering 229.408
CRR073320Tawny withering 331.657