Gene detail

Detail information of GWHGAAZE024765

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011091953.1	PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1 [Sesamum indicum]
Swissprot	tr\|Q9FGY9\|PNG1_ARATH	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
trEMBL	tr\|A0A068UJP1\|A0A068UJP1_COFCA	Coffea canephora DH200=94 genomic scaffold, scaffold_34 {ECO:0000313\|EMBL:CDP08522.1}
TAIR10	AT5G49570.1	peptide-N-glycanase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	48950116	48967670	-
GWHAAZE00000007	mRNA	48950116	48967670	-
GWHAAZE00000007	exon	48967603	48967670	-
GWHAAZE00000007	exon	48966412	48966541	-
GWHAAZE00000007	exon	48966192	48966290	-
GWHAAZE00000007	exon	48965412	48965510	-
GWHAAZE00000007	exon	48963583	48963665	-
GWHAAZE00000007	exon	48959947	48960060	-
GWHAAZE00000007	exon	48956618	48956672	-
GWHAAZE00000007	exon	48956380	48956546	-
GWHAAZE00000007	exon	48954169	48954224	-
GWHAAZE00000007	exon	48954022	48954097	-
GWHAAZE00000007	exon	48953817	48953904	-
GWHAAZE00000007	exon	48952972	48953724	-
GWHAAZE00000007	exon	48952790	48952850	-
GWHAAZE00000007	exon	48950116	48950270	-
GWHAAZE00000007	CDS	48967603	48967670	-
GWHAAZE00000007	CDS	48966412	48966541	-
GWHAAZE00000007	CDS	48966192	48966290	-
GWHAAZE00000007	CDS	48965412	48965510	-
GWHAAZE00000007	CDS	48963583	48963665	-
GWHAAZE00000007	CDS	48959947	48960060	-
GWHAAZE00000007	CDS	48956618	48956672	-
GWHAAZE00000007	CDS	48956380	48956546	-
GWHAAZE00000007	CDS	48954169	48954224	-
GWHAAZE00000007	CDS	48954022	48954097	-
GWHAAZE00000007	CDS	48953817	48953904	-
GWHAAZE00000007	CDS	48952972	48953724	-
GWHAAZE00000007	CDS	48952790	48952850	-
GWHAAZE00000007	CDS	48950116	48950270	-

Transcript Sequence
>GWHTAAZE024799 ATGCTCATTTCTAGGTTTTCAAATTCCAGCTCTTCTCTCTTACTTCGATTCCTCCGGATGAGCAAAAGTGAGGAAGTGGAAGAAGAAGGTAGGTTGATACCAATTGAAGGAGAAGATGATGAAGAGAAGGTAGAAAACAAAGCCACTCAAGAAGTCGAATTAGCTTTATCTGATGAAGAACTGGCTCGGATGTTGCAGGCAGAAGAAGAAGCACTTATGTTTCAGCAGTTCTCTGTCAGTGAAGATAATGGAGTAATTGAGCAGAAGATACGTCCTTATATCGATCAGGTCCTCCTGTATGAAGACCCACATCGCCAAGAAGCGGCTCGGAAGTCGGTACCCGTGGAGAAGCTTGAGGAGAAAGCGTTGGTTGCGTTGGCCAAGGTTGGATCTCTGGAGGGAAGCTTTAGACCTCTAAAAAGTGAACAGGATCATGCTTTCCTGCTGCAGCTGCTTTTCTGGTTCAAACAATCATTCAGGTGGGTACATTCACCTCCTTGCGATGGCTGTGGTAATGAAACAGTGAATAATGGCATGGGTGCTCCACAACCTTCAGAAACTCTCCATGGAGCTTCTCGAGTTGAAATTTATAGCTGCAAGGTTTGCTCCAGAGTCACTCGTTTCCCGCGGTACAATGATCCACTAAAGCTTCTGGAAACAAGAAAGGGGCGTTGCGGGGAGTGGGCAAATTGCTTCACCCTCTATTGCCGAGCTTTTGGTTATGAATCTCGTCTGGTTAGTCACCTTTCTAGAAAATCATATTTGGTTTCTATTGTTAAGTTTCTATCCCTACCCCCACCCCCACCCCAGTGGAAGTCATGGATTTCAGTGATCATGTCTGGACGGAGTGCTTCTCACCTTTCTTGGGAAGATGGGCTATACTACAGATGGATGCATCTTGATCCCTGTGAAGCAATATATGACAAGCCACTACTATATGAGAAGGGCTGGAAAAAAAAGTTGAACTATACAATTGCTATTGCAAAAGATGGAGTCTATGATGTCACTAAACGTTACACAAGGAAGTGGCATGAGGTTCTATCTCGACGAAATTTGACAACAGAGCCTGCTCTGGCTGCTGCTCTCCATAAGTTAACAAGAGAGTGCCGTAAGAACTTTACACCTGAAGTGCTTTCTGCACTTGAAGAACGTGACAAGAATGAAGCAGAAGCAATCGAGAGAGATTGTCATTCTAAAGACGATGCTTCAATCTCATTACCTGGAAGACAAAGCGGCAACAAGGAATGGAGAATCCTAAGATCAGAATTTGGTTCCGATTCTTTAAGTTCTTCTTCTTGTCCCGTTCGTAAATGTGTAGACGAGCACGTGACAAAGGTCTATAATGCATTGCTTCCCATCCTTTCAAAGTTAGTGGATCAATCTTATTCTAAATCTAGGGCTGTTGAGGTCCTAGGGATTTTCAGAAAGATTTTGGTGGATATCAAGAATTCTCCTTTTAGAAGCAGGAGAACAACTGTAAATTCCGCTTCGAATGATGCACAGTATTTTTTTAATCAGATATTACCCTCATTCGGCCAATTGCTTGATGCTCTTTCACTGAAGAGCGAGTTGAATACAAATGGGAAGGTCGAGATTTGTTTGGCTTCTGATCCTGTTAGAACCTCCTTGGCATTGCCTGTTGTGTTCCATGCCCTAGACGATGTGGTCCATAATGTTAACCAATGTGATAAATTTAATAAAGGTTCTCTTTCTTGGCCTCTAGTGAAGTTAAACAGAATATGTTCTGGTCTAGTTCTTGCTAGTGGGGAGGAGATTCCTGTCGGAATAGCAACATCTGCATTTGACGGAATGCGCCTTTCAAAGTGGGAAGAACCCAATGGTGCAAAAGATGACAAATTTGGTGTTTTTGTAGGTTGTTGGATCATATACAAGGTAGTGGACAACCAAGTGCATGAACTTGTAGCTTACGAGTTAATGTCAGCCAATGACGTTCCAGAGAGGGATCCAATGGACTGGTATGATTTTTTCATAAGAACCAAGTAA

Network for GWHGAAZE024765

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01841.20	Transglut_core	203	302	9.00E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01456	E3.5.1.52, NGLY1, PNG1	Protein processing in endoplasmic reticulum	map04141

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	37.498
	SRR3591706	second leaf	19.791
	SRR3591707	mature leaf	18.144
	SRR3591708	Shoot apex	25.362
	SRR3591709	Stem	41.065
	SRR3591710	White floral bud	42.279
	SRR3591711	White flower	43.001
	SRR3591712	Green floral bud	35.915
	SRR3591713	Yellow flower	36.286
SRP173429	SRR8316895	Juvenile bud stage	17.619
	SRR8316896	Juvenile bud stage	23.980
	SRR8316897	Juvenile bud stage	12.443
	SRR8316894	Third green stage	9.219
	SRR8316900	Third green stage	26.596
	SRR8316901	Third green stage	22.414
	SRR8316898	Complete white stage	11.602
	SRR8316899	Complete white stage	38.670
	SRR8316903	Complete white stage	21.159
	SRR8316902	Silver flowering stage	11.712
	SRR8316904	Silver flowering stage	18.624
	SRR8316905	Silver flowering stage	9.072
	SRR8316906	Gold flowering stage	31.776
	SRR8316907	Gold flowering stage	31.869
	SRR8316908	Gold flowering stage	31.289
SRP132670	SRR6706286	Control	24.595
	SRR6706287	Light intensity 50%	25.900
	SRR6706288	Light intensity 20%	27.948
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.417
	CNS0095593	Slightly white alabastrum(diploid) 2	15.359
	CNS0095594	Slightly white alabastrum(diploid) 3	14.001
	CNS0095595	Whole white alabastrum(diploid) 2	15.081
	CNS0095596	Whole white alabastrum(diploid) 3	11.117
	CNS0095597	Whole white alabastrum(diploid) 4	14.005
	CNS0095598	Silvery flower (diploied) 1	24.986
	CNS0095599	Silvery flower (diploied) 2	19.666
	CNS0095600	Silvery flower (diploied) 3	40.770
	CNS0095601	Golden flower (diploid) 1	20.219
	CNS0095602	Golden flower (diploid) 2	41.407
	CNS0095603	Golden flower (diploid) 3	40.445
	CNS0095604	Slightly white alabastrum(tetraploid) 1	20.339
	CNS0095605	Slightly white alabastrum(tetraploid) 2	14.874
	CNS0095606	Slightly white alabastrum(tetraploid) 3	41.570
	CNS0095607	Whole white alabastrum(tetraploid) 1	12.964
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.857
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.729
	CNS0095610	Silvery flower (tetraploid) 1	33.588
	CNS0095611	Silvery flower (tetraploid) 2	39.522
	CNS0095612	Silvery flower (tetraploid) 3	40.850
	CNS0095613	Golden flower (tetraploid) 1	18.174
	CNS0095614	Golden flower (tetraploid) 2	29.501
	CNS0095615	Golden flower (tetraploid) 3	28.302
CRA001975	CRR073297	Stem 1	32.425
	CRR073298	Stem 2	26.468
	CRR073299	Stem 3	28.674
	CRR073300	Leaf 1	29.820
	CRR073301	Leaf 2	28.527
	CRR073302	Leaf 3	29.083
	CRR073303	Juvenile bud 1	28.493
	CRR073304	Juvenile bud 2	26.273
	CRR073305	Juvenile bud 3	33.824
	CRR073306	Third green 1	15.331
	CRR073307	Third green 2	12.593
	CRR073308	Third green 3	14.671
	CRR073309	Second white 1	18.332
	CRR073310	Second white 2	24.594
	CRR073311	Second white 3	24.307
	CRR073312	Silver flowering 1	14.904
	CRR073313	Silver flowering 2	9.478
	CRR073314	Silver flowering 3	12.459
	CRR073315	Gold flowering 1	15.731
	CRR073316	Gold flowering 2	23.686
	CRR073317	Gold flowering 3	17.156
	CRR073318	Tawny withering 1	27.647
	CRR073319	Tawny withering 2	24.968
	CRR073320	Tawny withering 3	22.810