Detail information of GWHGAAZE024770


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFQ62613.10phosphatidylinositol-4-phosphate 5-kinase [Nicotiana tabacum]
COGYP_004253406.12E-37TIR protein
Swissprottr|Q9SFB8|PI5K6_ARATH0Phosphatidylinositol 4-phosphate 5-kinase 6
trEMBLtr|J7K3W0|J7K3W0_TOBAC0Phosphatidylinositol-4-phosphate 5-kinase {ECO:0000313|EMBL:AFQ62613.1}
TAIR10AT3G07960.10Phosphatidylinositol-4-phosphate 5-kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4905352749060001-
GWHAAZE00000007mRNA4905352749060001-
GWHAAZE00000007exon4905352749053809-
GWHAAZE00000007exon4905446149054536-
GWHAAZE00000007exon4905463149054746-
GWHAAZE00000007exon4905606749056260-
GWHAAZE00000007exon4905641249056528-
GWHAAZE00000007exon4905747449057639-
GWHAAZE00000007exon4905809149058258-
GWHAAZE00000007exon4905888149060001-
GWHAAZE00000007CDS4905888149060001-
GWHAAZE00000007CDS4905809149058258-
GWHAAZE00000007CDS4905747449057639-
GWHAAZE00000007CDS4905641249056528-
GWHAAZE00000007CDS4905606749056260-
GWHAAZE00000007CDS4905463149054746-
GWHAAZE00000007CDS4905446149054536-
GWHAAZE00000007CDS4905352749053809-
Transcript Sequence

Network for GWHGAAZE024770

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02493.21MORN56789.30E-05
PF02493.21MORN791003.70E-05
PF02493.21MORN1021240.00047
PF02493.21MORN1251460.00015
PF02493.21MORN1481691.10E-06
PF02493.21MORN1711934.10E-07
PF02493.21MORN1942152.70E-05
PF01504.19PIP5K4507401.90E-94
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00889PIP5K Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070
Phospholipase D signaling pathwaymap04072
Endocytosismap04144
Mitophagy - yeastmap04139
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Fc gamma R-mediated phagocytosismap04666

Gene Ontology

GO term OntologyName
GO:0046488biological_processphosphatidylinositol metabolic process
GO:0016307molecular_functionphosphatidylinositol phosphate kinase activity
GO:0005524molecular_functionATP binding
GO:0016308molecular_function1-phosphatidylinositol-4-phosphate 5-kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.074
SRR3591708Shoot apex0.186
SRR3591709Stem0.063
SRR3591710White floral bud9.017
SRR3591711White flower0.263
SRR3591712Green floral bud9.518
SRR3591713Yellow flower0.245
SRP173429 SRR8316895Juvenile bud stage 0.784
SRR8316896Juvenile bud stage 2.686
SRR8316897Juvenile bud stage 1.974
SRR8316894Third green stage 1.142
SRR8316900Third green stage 6.731
SRR8316901Third green stage 7.113
SRR8316898Complete white stage 0.023
SRR8316899Complete white stage 0.483
SRR8316903Complete white stage 0.075
SRR8316902Silver flowering stage0.033
SRR8316904Silver flowering stage0.297
SRR8316905Silver flowering stage0.103
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.018
SRP132670SRR6706286Control3.769
SRR6706287Light intensity 50%3.440
SRR6706288Light intensity 20%3.508
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.222
CNS0095593Slightly white alabastrum(diploid) 24.007
CNS0095594Slightly white alabastrum(diploid) 34.244
CNS0095595Whole white alabastrum(diploid) 27.967
CNS0095596Whole white alabastrum(diploid) 39.593
CNS0095597Whole white alabastrum(diploid) 411.685
CNS0095598Silvery flower (diploied) 10.529
CNS0095599Silvery flower (diploied) 21.083
CNS0095600Silvery flower (diploied) 30.428
CNS0095601Golden flower (diploid) 10.864
CNS0095602Golden flower (diploid) 20.986
CNS0095603Golden flower (diploid) 31.032
CNS0095604Slightly white alabastrum(tetraploid) 17.620
CNS0095605Slightly white alabastrum(tetraploid) 27.008
CNS0095606Slightly white alabastrum(tetraploid) 30.136
CNS0095607Whole white alabastrum(tetraploid) 114.384
CNS0095608Whole white alabastrum(tetraploid) 215.849
CNS0095609Whole white alabastrum(tetraploid) 39.060
CNS0095610Silvery flower (tetraploid) 10.183
CNS0095611Silvery flower (tetraploid) 20.987
CNS0095612Silvery flower (tetraploid) 31.646
CNS0095613Golden flower (tetraploid) 10.177
CNS0095614Golden flower (tetraploid) 20.073
CNS0095615Golden flower (tetraploid) 31.351
CRA001975CRR073297Stem 11.526
CRR073298Stem 21.682
CRR073299Stem 30.728
CRR073300Leaf 15.968
CRR073301Leaf 23.477
CRR073302Leaf 31.887
CRR073303Juvenile bud 14.279
CRR073304Juvenile bud 24.955
CRR073305Juvenile bud 30.404
CRR073306Third green 11.832
CRR073307Third green 22.011
CRR073308Third green 31.989
CRR073309Second white 10.000
CRR073310Second white 20.625
CRR073311Second white 30.296
CRR073312Silver flowering 12.030
CRR073313Silver flowering 22.650
CRR073314Silver flowering 30.646
CRR073315Gold flowering 11.530
CRR073316Gold flowering 21.013
CRR073317Gold flowering 30.589
CRR073318Tawny withering 11.992
CRR073319Tawny withering 21.654
CRR073320Tawny withering 31.006