Detail information of GWHGAAZE024777


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKGN43676.14.48961E-39hypothetical protein Csa_7G057530 [Cucumis sativus]
Swissprottr|F4I171|MD15A_ARATH2E-14Mediator of RNA polymerase II transcription subunit 15a
trEMBLtr|A0A0A0K778|A0A0A0K778_CUCSA2E-39Uncharacterized protein {ECO:0000313|EMBL:KGN43676.1}
TAIR10AT1G15780.10.002Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4920496049206520-
GWHAAZE00000007mRNA4920496049206520-
GWHAAZE00000007exon4920496049204964-
GWHAAZE00000007exon4920517049206034-
GWHAAZE00000007exon4920623649206520-
GWHAAZE00000007CDS4920623649206520-
GWHAAZE00000007CDS4920517049206034-
GWHAAZE00000007CDS4920496049204964-
Transcript Sequence

Network for GWHGAAZE024777

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0259


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.342
SRR3591706second leaf17.730
SRR3591707mature leaf23.675
SRR3591708Shoot apex20.363
SRR3591709Stem39.635
SRR3591710White floral bud47.062
SRR3591711White flower52.333
SRR3591712Green floral bud28.118
SRR3591713Yellow flower37.066
SRP173429 SRR8316895Juvenile bud stage 10.528
SRR8316896Juvenile bud stage 13.800
SRR8316897Juvenile bud stage 6.482
SRR8316894Third green stage 6.938
SRR8316900Third green stage 15.531
SRR8316901Third green stage 15.518
SRR8316898Complete white stage 5.164
SRR8316899Complete white stage 18.094
SRR8316903Complete white stage 20.588
SRR8316902Silver flowering stage11.915
SRR8316904Silver flowering stage23.452
SRR8316905Silver flowering stage9.535
SRR8316906Gold flowering stage 29.203
SRR8316907Gold flowering stage 28.244
SRR8316908Gold flowering stage 24.995
SRP132670SRR6706286Control33.067
SRR6706287Light intensity 50%30.105
SRR6706288Light intensity 20%31.215
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.749
CNS0095593Slightly white alabastrum(diploid) 24.123
CNS0095594Slightly white alabastrum(diploid) 33.750
CNS0095595Whole white alabastrum(diploid) 25.654
CNS0095596Whole white alabastrum(diploid) 32.954
CNS0095597Whole white alabastrum(diploid) 45.263
CNS0095598Silvery flower (diploied) 19.620
CNS0095599Silvery flower (diploied) 29.356
CNS0095600Silvery flower (diploied) 344.169
CNS0095601Golden flower (diploid) 19.537
CNS0095602Golden flower (diploid) 244.323
CNS0095603Golden flower (diploid) 344.764
CNS0095604Slightly white alabastrum(tetraploid) 17.501
CNS0095605Slightly white alabastrum(tetraploid) 23.528
CNS0095606Slightly white alabastrum(tetraploid) 324.481
CNS0095607Whole white alabastrum(tetraploid) 16.100
CNS0095608Whole white alabastrum(tetraploid) 24.565
CNS0095609Whole white alabastrum(tetraploid) 315.878
CNS0095610Silvery flower (tetraploid) 138.692
CNS0095611Silvery flower (tetraploid) 245.377
CNS0095612Silvery flower (tetraploid) 340.442
CNS0095613Golden flower (tetraploid) 112.478
CNS0095614Golden flower (tetraploid) 229.565
CNS0095615Golden flower (tetraploid) 353.263
CRA001975CRR073297Stem 127.213
CRR073298Stem 228.296
CRR073299Stem 318.783
CRR073300Leaf 131.991
CRR073301Leaf 226.028
CRR073302Leaf 318.070
CRR073303Juvenile bud 120.003
CRR073304Juvenile bud 217.638
CRR073305Juvenile bud 343.235
CRR073306Third green 131.644
CRR073307Third green 220.437
CRR073308Third green 328.806
CRR073309Second white 120.482
CRR073310Second white 229.883
CRR073311Second white 340.981
CRR073312Silver flowering 136.040
CRR073313Silver flowering 256.406
CRR073314Silver flowering 339.346
CRR073315Gold flowering 18.077
CRR073316Gold flowering 220.592
CRR073317Gold flowering 316.346
CRR073318Tawny withering 117.289
CRR073319Tawny withering 210.065
CRR073320Tawny withering 314.042