Detail information of GWHGAAZE024783


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010658929.13.17679E-86PREDICTED: uncharacterized protein LOC100252331 isoform X2 [Vitis vinifera]
trEMBLtr|F6HIY7|F6HIY7_VITVI3E-88Putative uncharacterized protein {ECO:0000313|EMBL:CCB52153.1}
TAIR10AT5G18440.25E-48Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4931859549324909-
GWHAAZE00000007mRNA4931859549324909-
GWHAAZE00000007exon4931859549319203-
GWHAAZE00000007exon4931972449319774-
GWHAAZE00000007exon4931986649319956-
GWHAAZE00000007exon4932009649320165-
GWHAAZE00000007exon4932461149324687-
GWHAAZE00000007exon4932478949324909-
GWHAAZE00000007five_prime_UTR4932490549324909-
GWHAAZE00000007CDS4932478949324904-
GWHAAZE00000007CDS4932461149324687-
GWHAAZE00000007CDS4932009649320165-
GWHAAZE00000007CDS4931986649319956-
GWHAAZE00000007CDS4931972449319774-
GWHAAZE00000007CDS4931859549319203-
Transcript Sequence

Network for GWHGAAZE024783

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10453.10NUFIP1801247.90E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14404CPSF4, YTH1 mRNA surveillance pathway map03015

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.741
SRR3591706second leaf5.848
SRR3591707mature leaf8.047
SRR3591708Shoot apex25.068
SRR3591709Stem11.255
SRR3591710White floral bud10.620
SRR3591711White flower19.961
SRR3591712Green floral bud18.899
SRR3591713Yellow flower13.845
SRP173429 SRR8316895Juvenile bud stage 16.639
SRR8316896Juvenile bud stage 21.991
SRR8316897Juvenile bud stage 11.579
SRR8316894Third green stage 7.883
SRR8316900Third green stage 20.555
SRR8316901Third green stage 20.039
SRR8316898Complete white stage 1.321
SRR8316899Complete white stage 17.262
SRR8316903Complete white stage 5.187
SRR8316902Silver flowering stage5.407
SRR8316904Silver flowering stage6.886
SRR8316905Silver flowering stage2.227
SRR8316906Gold flowering stage 10.047
SRR8316907Gold flowering stage 10.232
SRR8316908Gold flowering stage 13.450
SRP132670SRR6706286Control14.684
SRR6706287Light intensity 50%13.099
SRR6706288Light intensity 20%15.270
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.118
CNS0095593Slightly white alabastrum(diploid) 226.405
CNS0095594Slightly white alabastrum(diploid) 328.203
CNS0095595Whole white alabastrum(diploid) 219.337
CNS0095596Whole white alabastrum(diploid) 317.322
CNS0095597Whole white alabastrum(diploid) 413.161
CNS0095598Silvery flower (diploied) 120.989
CNS0095599Silvery flower (diploied) 213.769
CNS0095600Silvery flower (diploied) 39.439
CNS0095601Golden flower (diploid) 114.465
CNS0095602Golden flower (diploid) 29.433
CNS0095603Golden flower (diploid) 37.304
CNS0095604Slightly white alabastrum(tetraploid) 121.036
CNS0095605Slightly white alabastrum(tetraploid) 219.545
CNS0095606Slightly white alabastrum(tetraploid) 332.795
CNS0095607Whole white alabastrum(tetraploid) 112.784
CNS0095608Whole white alabastrum(tetraploid) 211.308
CNS0095609Whole white alabastrum(tetraploid) 319.823
CNS0095610Silvery flower (tetraploid) 118.460
CNS0095611Silvery flower (tetraploid) 214.166
CNS0095612Silvery flower (tetraploid) 310.727
CNS0095613Golden flower (tetraploid) 112.255
CNS0095614Golden flower (tetraploid) 214.257
CNS0095615Golden flower (tetraploid) 36.064
CRA001975CRR073297Stem 122.458
CRR073298Stem 221.966
CRR073299Stem 317.216
CRR073300Leaf 119.993
CRR073301Leaf 220.308
CRR073302Leaf 312.540
CRR073303Juvenile bud 113.290
CRR073304Juvenile bud 26.827
CRR073305Juvenile bud 312.865
CRR073306Third green 12.809
CRR073307Third green 20.693
CRR073308Third green 31.942
CRR073309Second white 15.488
CRR073310Second white 27.920
CRR073311Second white 33.867
CRR073312Silver flowering 12.675
CRR073313Silver flowering 22.474
CRR073314Silver flowering 32.248
CRR073315Gold flowering 112.464
CRR073316Gold flowering 220.488
CRR073317Gold flowering 38.666
CRR073318Tawny withering 119.362
CRR073319Tawny withering 219.033
CRR073320Tawny withering 325.279