Detail information of GWHGAAZE024800


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007220913.10hypothetical protein PRUPE_ppa000586mg [Prunus persica]
COGYP_004265896.12E-87Fucokinase
Swissprottr|Q9LNJ9|FKGP_ARATH0Fucose-1-phosphate guanylyltransferase
trEMBLtr|M5X7R9|M5X7R9_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ22112.1}
TAIR10AT1G01220.10L-fucokinase/GDP-L-fucose pyrophosphorylase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4962195649630796-
GWHAAZE00000007mRNA4962195649630796-
GWHAAZE00000007exon4963045849630796-
GWHAAZE00000007exon4962934949629622-
GWHAAZE00000007exon4962704049627422-
GWHAAZE00000007exon4962635649626482-
GWHAAZE00000007exon4962481349625826-
GWHAAZE00000007exon4962317649623912-
GWHAAZE00000007exon4962195649622362-
GWHAAZE00000007CDS4963045849630796-
GWHAAZE00000007CDS4962934949629622-
GWHAAZE00000007CDS4962704049627422-
GWHAAZE00000007CDS4962635649626482-
GWHAAZE00000007CDS4962481349625826-
GWHAAZE00000007CDS4962317649623912-
GWHAAZE00000007CDS4962196449622362-
GWHAAZE00000007three_prime_UTR4962195649621963-
Transcript Sequence

Network for GWHGAAZE024800

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07959.13Fucokinase1515544.00E-108
PF00288.27GHMP_kinases_N8519133.70E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05305FUK Metabolic pathways map01100
Fructose and mannose metabolismmap00051
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0005524molecular_functionATP binding
GO:0016772molecular_functiontransferase activity, transferring phosphorus-containing groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.813
SRR3591706second leaf10.444
SRR3591707mature leaf8.676
SRR3591708Shoot apex13.792
SRR3591709Stem12.759
SRR3591710White floral bud17.144
SRR3591711White flower22.659
SRR3591712Green floral bud39.785
SRR3591713Yellow flower14.870
SRP173429 SRR8316895Juvenile bud stage 8.953
SRR8316896Juvenile bud stage 18.558
SRR8316897Juvenile bud stage 14.538
SRR8316894Third green stage 8.295
SRR8316900Third green stage 26.818
SRR8316901Third green stage 20.464
SRR8316898Complete white stage 5.601
SRR8316899Complete white stage 15.324
SRR8316903Complete white stage 9.938
SRR8316902Silver flowering stage5.112
SRR8316904Silver flowering stage8.304
SRR8316905Silver flowering stage3.492
SRR8316906Gold flowering stage 12.000
SRR8316907Gold flowering stage 10.154
SRR8316908Gold flowering stage 12.801
SRP132670SRR6706286Control36.737
SRR6706287Light intensity 50%35.145
SRR6706288Light intensity 20%41.043
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.765
CNS0095593Slightly white alabastrum(diploid) 26.404
CNS0095594Slightly white alabastrum(diploid) 310.427
CNS0095595Whole white alabastrum(diploid) 28.374
CNS0095596Whole white alabastrum(diploid) 310.337
CNS0095597Whole white alabastrum(diploid) 412.509
CNS0095598Silvery flower (diploied) 110.844
CNS0095599Silvery flower (diploied) 26.873
CNS0095600Silvery flower (diploied) 321.556
CNS0095601Golden flower (diploid) 17.945
CNS0095602Golden flower (diploid) 217.921
CNS0095603Golden flower (diploid) 316.348
CNS0095604Slightly white alabastrum(tetraploid) 114.519
CNS0095605Slightly white alabastrum(tetraploid) 214.314
CNS0095606Slightly white alabastrum(tetraploid) 317.366
CNS0095607Whole white alabastrum(tetraploid) 119.771
CNS0095608Whole white alabastrum(tetraploid) 221.694
CNS0095609Whole white alabastrum(tetraploid) 366.991
CNS0095610Silvery flower (tetraploid) 121.472
CNS0095611Silvery flower (tetraploid) 224.137
CNS0095612Silvery flower (tetraploid) 321.614
CNS0095613Golden flower (tetraploid) 17.311
CNS0095614Golden flower (tetraploid) 214.096
CNS0095615Golden flower (tetraploid) 312.449
CRA001975CRR073297Stem 114.871
CRR073298Stem 215.511
CRR073299Stem 314.388
CRR073300Leaf 115.346
CRR073301Leaf 212.573
CRR073302Leaf 315.352
CRR073303Juvenile bud 110.327
CRR073304Juvenile bud 210.694
CRR073305Juvenile bud 311.402
CRR073306Third green 14.331
CRR073307Third green 23.187
CRR073308Third green 34.667
CRR073309Second white 15.280
CRR073310Second white 26.647
CRR073311Second white 36.932
CRR073312Silver flowering 15.492
CRR073313Silver flowering 26.088
CRR073314Silver flowering 35.674
CRR073315Gold flowering 13.671
CRR073316Gold flowering 25.940
CRR073317Gold flowering 35.289
CRR073318Tawny withering 16.007
CRR073319Tawny withering 26.423
CRR073320Tawny withering 35.473