Gene detail

Detail information of GWHGAAZE025021

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011098061.1	0	PREDICTED: putative GPI-anchor transamidase [Sesamum indicum]
COG	YP_501969.1	4E-26	Legumain
Swissprot	tr\|Q39119\|VPEG_ARATH	2E-20	Vacuolar-processing enzyme gamma-isozyme (Precursor)
trEMBL	tr\|K4CXW4\|K4CXW4_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc10g007850.2.1}
TAIR10	AT1G08750.3	1E-150	Peptidase C13 family

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	53698765	53702978	+
GWHAAZE00000007	mRNA	53698765	53702978	+
GWHAAZE00000007	exon	53698765	53698799	+
GWHAAZE00000007	exon	53698876	53698917	+
GWHAAZE00000007	exon	53699056	53699200	+
GWHAAZE00000007	exon	53699959	53700188	+
GWHAAZE00000007	exon	53700824	53700881	+
GWHAAZE00000007	exon	53701537	53701614	+
GWHAAZE00000007	exon	53701768	53701856	+
GWHAAZE00000007	exon	53702305	53702386	+
GWHAAZE00000007	exon	53702733	53702978	+
GWHAAZE00000007	CDS	53698765	53698799	+
GWHAAZE00000007	CDS	53698876	53698917	+
GWHAAZE00000007	CDS	53699056	53699200	+
GWHAAZE00000007	CDS	53699959	53700188	+
GWHAAZE00000007	CDS	53700824	53700881	+
GWHAAZE00000007	CDS	53701537	53701614	+
GWHAAZE00000007	CDS	53701768	53701856	+
GWHAAZE00000007	CDS	53702305	53702386	+
GWHAAZE00000007	CDS	53702733	53702978	+

Transcript Sequence
>GWHTAAZE025055 ATGGCGCTTTTCTGTTTAAACAGTACACTGTCAAGGTTTAATTATCGTCATATGGCTAATACTTTGTCCTTATACAGGACTGTAAAACGGCTAGGAATACCCGATGAGAGGATAATATTAATGTTGGCTGATGATATGGCTTGCAATGCTCGTAACAAGTACCCTGCACAAGTCTTCAACAATGAAAACCACAGGCTTAACTTGTATGGAGATAATGTTGAGGTGGATTATCGAGGTTATGAGGTGACCGTTGAAAACTTTTTCCGAGTTCTAACGGGACGTCACGAGAATGCTGTTCCAAGGTCAAAACGTCTTCTCAGTGACGAAGGAAGCCACATACTGTTATACATGACAGGCCATGGTGGGGACGAGTTTCTAAAATTCCAGGACTCGGAGGAGCTGCAGAGTCATGATTTAGCTGATGCAGTTAAACAAATGAAAGAAAAGCGTAGATTTAAGGAGCTGCTGATTATGGTAGACACTTGCCAAGCCGCTACTCTCTTTTCTCAGCTTCAGTCACCAGGTGTTTTGGCTATTGGAAGTAGCATGAAAGGCGAAAACTCTTACTCACATCACTTGGATTCTGATGTTGGTGTCTCTGTTGTGGATCGTTTCACATTTTATACCCTTGCTTTCTTTGAGCGGCTAAATATGTATGACAATGCTTCATTGAGCAGTCTTTTCAGTTCATATAATCCAAACTTGTTGATGTCAACTGCGTATTACCGAACAGATCTATACCAACGACGACTGGATGAGGTACCTGTGACAAACTTCTTTGGTTCGGTCATGGAAACGATTCACACTGATTCTGCTTATAGAGCCTTCTCAGGCAAATACTTCAGCAGAGATAAAACCAAACTGCCATCTGATCAATCAGAGCGAAGAACAATTCTAAGTTCAGACATTCATCAACCAATTAGTGACTCAAAAAGGGTAAATTTTGCCAAGAAAATTTCGTCTAAATTTCTTTTAATAGACCTTATTGTTCAATTGTGTTGCTAA

Network for GWHGAAZE025021

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01650.19	Peptidase_C13	14	228	7.90E-41

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05290	PIGK	Metabolic pathways	map01100
K05290	PIGK	Glycosylphosphatidylinositol	map00563

Gene Ontology

GO term	Ontology	Name
GO:0006508	biological_process	proteolysis
GO:0008233	molecular_function	peptidase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	37.885
	SRR3591706	second leaf	17.414
	SRR3591707	mature leaf	13.086
	SRR3591708	Shoot apex	27.836
	SRR3591709	Stem	26.450
	SRR3591710	White floral bud	14.376
	SRR3591711	White flower	13.586
	SRR3591712	Green floral bud	20.541
	SRR3591713	Yellow flower	11.244
SRP173429	SRR8316895	Juvenile bud stage	12.618
	SRR8316896	Juvenile bud stage	14.596
	SRR8316897	Juvenile bud stage	7.911
	SRR8316894	Third green stage	7.571
	SRR8316900	Third green stage	16.517
	SRR8316901	Third green stage	18.221
	SRR8316898	Complete white stage	5.893
	SRR8316899	Complete white stage	23.193
	SRR8316903	Complete white stage	8.700
	SRR8316902	Silver flowering stage	6.832
	SRR8316904	Silver flowering stage	10.502
	SRR8316905	Silver flowering stage	4.494
	SRR8316906	Gold flowering stage	12.251
	SRR8316907	Gold flowering stage	9.816
	SRR8316908	Gold flowering stage	12.304
SRP132670	SRR6706286	Control	9.663
	SRR6706287	Light intensity 50%	10.781
	SRR6706288	Light intensity 20%	12.981
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	12.204
	CNS0095593	Slightly white alabastrum(diploid) 2	11.786
	CNS0095594	Slightly white alabastrum(diploid) 3	11.933
	CNS0095595	Whole white alabastrum(diploid) 2	11.141
	CNS0095596	Whole white alabastrum(diploid) 3	12.871
	CNS0095597	Whole white alabastrum(diploid) 4	11.349
	CNS0095598	Silvery flower (diploied) 1	5.766
	CNS0095599	Silvery flower (diploied) 2	6.426
	CNS0095600	Silvery flower (diploied) 3	9.160
	CNS0095601	Golden flower (diploid) 1	8.590
	CNS0095602	Golden flower (diploid) 2	10.155
	CNS0095603	Golden flower (diploid) 3	9.039
	CNS0095604	Slightly white alabastrum(tetraploid) 1	18.308
	CNS0095605	Slightly white alabastrum(tetraploid) 2	19.441
	CNS0095606	Slightly white alabastrum(tetraploid) 3	19.793
	CNS0095607	Whole white alabastrum(tetraploid) 1	10.778
	CNS0095608	Whole white alabastrum(tetraploid) 2	8.534
	CNS0095609	Whole white alabastrum(tetraploid) 3	16.606
	CNS0095610	Silvery flower (tetraploid) 1	9.660
	CNS0095611	Silvery flower (tetraploid) 2	10.030
	CNS0095612	Silvery flower (tetraploid) 3	9.292
	CNS0095613	Golden flower (tetraploid) 1	4.607
	CNS0095614	Golden flower (tetraploid) 2	6.410
	CNS0095615	Golden flower (tetraploid) 3	6.543
CRA001975	CRR073297	Stem 1	15.049
	CRR073298	Stem 2	14.035
	CRR073299	Stem 3	12.545
	CRR073300	Leaf 1	17.055
	CRR073301	Leaf 2	12.353
	CRR073302	Leaf 3	15.093
	CRR073303	Juvenile bud 1	14.160
	CRR073304	Juvenile bud 2	9.636
	CRR073305	Juvenile bud 3	8.614
	CRR073306	Third green 1	3.424
	CRR073307	Third green 2	1.833
	CRR073308	Third green 3	3.585
	CRR073309	Second white 1	3.206
	CRR073310	Second white 2	4.998
	CRR073311	Second white 3	3.268
	CRR073312	Silver flowering 1	2.364
	CRR073313	Silver flowering 2	0.848
	CRR073314	Silver flowering 3	0.362
	CRR073315	Gold flowering 1	5.760
	CRR073316	Gold flowering 2	9.113
	CRR073317	Gold flowering 3	5.527
	CRR073318	Tawny withering 1	13.203
	CRR073319	Tawny withering 2	12.575
	CRR073320	Tawny withering 3	15.865