Detail information of GWHGAAZE025027


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002511650.11.4538E-154conserved hypothetical protein [Ricinus communis]
Swissprottr|O65499|ZAT3_ARATH4E-29Zinc finger protein ZAT3
trEMBLtr|B9RD61|B9RD61_RICCO5E-155Putative uncharacterized protein {ECO:0000313|EMBL:EEF50319.1}
TAIR10AT4G35280.13E-25C2H2-like zinc finger protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene5380226353803459-
GWHAAZE00000007mRNA5380226353803459-
GWHAAZE00000007exon5380226353803459-
GWHAAZE00000007CDS5380226353803459-
Transcript Sequence

Network for GWHGAAZE025027

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_61571811.50E-09
PF13912.7zf-C2H2_62352597.60E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.341
SRR3591710White floral bud16.419
SRR3591711White flower1.083
SRR3591712Green floral bud31.897
SRR3591713Yellow flower0.245
SRP173429 SRR8316895Juvenile bud stage 0.067
SRR8316896Juvenile bud stage 0.111
SRR8316897Juvenile bud stage 0.889
SRR8316894Third green stage 0.790
SRR8316900Third green stage 17.651
SRR8316901Third green stage 14.334
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.043
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.061
SRR8316904Silver flowering stage0.227
SRR8316905Silver flowering stage0.057
SRR8316906Gold flowering stage 0.067
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.169
SRP132670SRR6706286Control15.330
SRR6706287Light intensity 50%13.603
SRR6706288Light intensity 20%13.232
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.886
CNS0095593Slightly white alabastrum(diploid) 210.696
CNS0095594Slightly white alabastrum(diploid) 310.381
CNS0095595Whole white alabastrum(diploid) 242.655
CNS0095596Whole white alabastrum(diploid) 348.522
CNS0095597Whole white alabastrum(diploid) 469.894
CNS0095598Silvery flower (diploied) 10.562
CNS0095599Silvery flower (diploied) 22.040
CNS0095600Silvery flower (diploied) 30.494
CNS0095601Golden flower (diploid) 10.352
CNS0095602Golden flower (diploid) 20.091
CNS0095603Golden flower (diploid) 30.164
CNS0095604Slightly white alabastrum(tetraploid) 122.220
CNS0095605Slightly white alabastrum(tetraploid) 222.580
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 167.203
CNS0095608Whole white alabastrum(tetraploid) 290.131
CNS0095609Whole white alabastrum(tetraploid) 337.422
CNS0095610Silvery flower (tetraploid) 10.424
CNS0095611Silvery flower (tetraploid) 20.740
CNS0095612Silvery flower (tetraploid) 32.143
CNS0095613Golden flower (tetraploid) 10.184
CNS0095614Golden flower (tetraploid) 20.153
CNS0095615Golden flower (tetraploid) 31.507
CRA001975CRR073297Stem 10.976
CRR073298Stem 22.213
CRR073299Stem 30.526
CRR073300Leaf 122.392
CRR073301Leaf 211.862
CRR073302Leaf 35.678
CRR073303Juvenile bud 112.310
CRR073304Juvenile bud 215.932
CRR073305Juvenile bud 30.571
CRR073306Third green 11.654
CRR073307Third green 22.513
CRR073308Third green 32.554
CRR073309Second white 10.085
CRR073310Second white 20.216
CRR073311Second white 30.481
CRR073312Silver flowering 11.923
CRR073313Silver flowering 21.220
CRR073314Silver flowering 31.126
CRR073315Gold flowering 11.844
CRR073316Gold flowering 20.445
CRR073317Gold flowering 30.520
CRR073318Tawny withering 11.764
CRR073319Tawny withering 22.148
CRR073320Tawny withering 32.288