Gene detail

Detail information of GWHGAAZE025092

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009622992.1	0	PREDICTED: cytochrome P450 714C2-like [Nicotiana tomentosiformis]
COG	YP_001546937.1	7E-48	cytochrome P450
Swissprot	tr\|Q2QYH7\|C14C2_ORYSJ	4E-171	Cytochrome P450 714C2
trEMBL	tr\|A0A022RK18\|A0A022RK18_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU40339.1}
TAIR10	AT5G24910.1	2E-120	cytochrome P450, family 714, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	54969976	54977169	-
GWHAAZE00000007	mRNA	54969976	54977169	-
GWHAAZE00000007	exon	54976925	54977169	-
GWHAAZE00000007	exon	54974314	54974575	-
GWHAAZE00000007	exon	54973338	54973579	-
GWHAAZE00000007	exon	54972150	54972519	-
GWHAAZE00000007	exon	54969976	54970401	-
GWHAAZE00000007	CDS	54976925	54977169	-
GWHAAZE00000007	CDS	54974314	54974575	-
GWHAAZE00000007	CDS	54973338	54973579	-
GWHAAZE00000007	CDS	54972150	54972519	-
GWHAAZE00000007	CDS	54969976	54970401	-

Transcript Sequence
>GWHTAAZE025126 ATGTTGAATAAAATGGGAGAAGATCTAACAAAGATGGTAGTGACAGTGGTTTTTGGTGGGTTTGTAGTGTTGTTCTTACATCTCTATAATATTTTGATTTTGAAGCCAAAAAGGATTAGATTAAAGCTTGTAAATCAAGGGATTAACGGACCTTCACCTTCTAATTTCTTGTTTGGAAATATCCCTGAAATCAAGAAGATCAATCAAGAGGTACGATCAGTTCCCAAAGCTCAATCCAACGGTGGTGGATGTGTTGGAAATTGTGGGGACCGGCGGCCAGGGCCAATATTCACGTACTCAACAGGACATATACAGATAGTGTGCATTACAGATGCAGAAATGGTGAAGGAAGTGAGCCTCAACACCTCTTTGAATTTAGGCAAACCTTCTTACCTATCAAAGGATCGTGGGCCCTTGCTGGGCCGGGGCATTCTCTCCTCAAGCGGCCCATATTGGGCCCACCAAAGGAAGATCATTGCCCCTGAGTTCTACCTCGACAAAATTGAGGACATGGTAAACTTAATGGGGGAGTCCACAATGAGAATGATACAAGCTTGGGAGGGTAAAAGGAAAAATAGCCAGGAATACGTAAACGTTAGAATCGACCAGGATTTGAGGAGTTTATCAGCAGATATAATATCAAGAGCTTGTTTCGGAAGCAATTATACCCAAGGGGAAAATATATTCTTAAAGCTTAGAAATCTTCAAGAGGTCATGTCTAAGAGCAGCATTGGTGTTCCAGGCTTAAGATATCTGCCTAGCAAAAACAACAGAGAGATATGGAGATTGGAGAAGGAGATAAACACAATGATATTAAAGGTGGTAAAAGAAAGAAGTGAAGCTACAAGTGAGAGAGACCTACTGCAATCAATACTAGAAGCAGCTAAAAGATATGGAGAAAATGGGAACTTACCTGTGGATATTACTCCTAACAAATTTATAGTTGATAATTGCAAGAACATTTACTTTGCTGGCCATGAGACCACAGCTACCTCGGCTTCATGGTGCTTGGTATTGTTGGCCACAAATCCAAACTGGCAAGATCGTGCTCGTGCTGAGGTGGTTGAAATTTGCAAGGGTAGGGTACCTGATGCTGATATGCTGAGAAAGATGAAGACGCTAAGAATGGTGATTCAAGAGACGCTGCGCCTCTACCCACCAGGAGCATTCATGATGAGAGAAACCCTCGAAGATGTAAATTTTAAACACATTCAGATTCCAAAAGGCATCAATCTTCAGATAACCACCCCTGTACTACACCAAAACACTGAGCTGTGGGGCCCAGACGCGGCTGAGTTCAACCCAGAAAGATTTGCAGAGGGGTCCAAAGGGGCTTGCGCAATCCCGCAGGCTTATATACCGTTTGGGGCTGGGAATCGCATATGTGCAGGTCAACACTTTGCCATGGCTGAACTGAAGGTGATTTTATCGCTCATTCTGCTGAAGTTTAGATTAAAATTGTCACCGGAGTATAAGCACTCGCCTGTATTTAGGTTAGTTATAGAACCTGGATACGGAGTATTTCTCGGTGTTAGGAAAGTGTAA

Network for GWHGAAZE025092

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	91	496	1.30E-82

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.801
	SRR3591706	second leaf	0.214
	SRR3591707	mature leaf	0.158
	SRR3591708	Shoot apex	0.227
	SRR3591709	Stem	0.078
	SRR3591710	White floral bud	0.217
	SRR3591711	White flower	0.429
	SRR3591712	Green floral bud	0.206
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.210
	SRR8316896	Juvenile bud stage	0.934
	SRR8316897	Juvenile bud stage	0.191
	SRR8316894	Third green stage	0.419
	SRR8316900	Third green stage	0.655
	SRR8316901	Third green stage	0.993
	SRR8316898	Complete white stage	0.094
	SRR8316899	Complete white stage	0.151
	SRR8316903	Complete white stage	0.213
	SRR8316902	Silver flowering stage	0.041
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.141
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.032
SRP132670	SRR6706286	Control	0.400
	SRR6706287	Light intensity 50%	0.512
	SRR6706288	Light intensity 20%	0.423
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.188
	CNS0095593	Slightly white alabastrum(diploid) 2	1.107
	CNS0095594	Slightly white alabastrum(diploid) 3	1.796
	CNS0095595	Whole white alabastrum(diploid) 2	0.856
	CNS0095596	Whole white alabastrum(diploid) 3	0.841
	CNS0095597	Whole white alabastrum(diploid) 4	0.719
	CNS0095598	Silvery flower (diploied) 1	0.844
	CNS0095599	Silvery flower (diploied) 2	1.463
	CNS0095600	Silvery flower (diploied) 3	0.268
	CNS0095601	Golden flower (diploid) 1	1.326
	CNS0095602	Golden flower (diploid) 2	0.606
	CNS0095603	Golden flower (diploid) 3	0.618
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.838
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.692
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.291
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.206
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.561
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.862
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.197
	CNS0095612	Silvery flower (tetraploid) 3	0.076
	CNS0095613	Golden flower (tetraploid) 1	0.062
	CNS0095614	Golden flower (tetraploid) 2	0.089
	CNS0095615	Golden flower (tetraploid) 3	0.065
CRA001975	CRR073297	Stem 1	0.327
	CRR073298	Stem 2	0.294
	CRR073299	Stem 3	0.231
	CRR073300	Leaf 1	0.247
	CRR073301	Leaf 2	0.237
	CRR073302	Leaf 3	0.080
	CRR073303	Juvenile bud 1	0.293
	CRR073304	Juvenile bud 2	0.074
	CRR073305	Juvenile bud 3	0.296
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.003
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.478
	CRR073317	Gold flowering 3	0.046
	CRR073318	Tawny withering 1	0.093
	CRR073319	Tawny withering 2	0.057
	CRR073320	Tawny withering 3	0.086