Detail information of GWHGAAZE025212


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008375270.11.5623E-158PREDICTED: alpha-N-acetylglucosaminidase-like [Malus domestica]
COGYP_005009197.14E-40Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase
trEMBLtr|W9RF76|W9RF76_9ROSA2E-158Uncharacterized protein {ECO:0000313|EMBL:EXB68327.1}
TAIR10AT5G13690.19E-120alpha-N-acetylglucosaminidase family / NAGLU family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene5744578257451386-
GWHAAZE00000007mRNA5744578257451386-
GWHAAZE00000007exon5744578257445821-
GWHAAZE00000007exon5744595957445989-
GWHAAZE00000007exon5744695257447058-
GWHAAZE00000007exon5744742957447510-
GWHAAZE00000007exon5744768757447781-
GWHAAZE00000007exon5744864157448726-
GWHAAZE00000007exon5744948157449602-
GWHAAZE00000007exon5745070757450918-
GWHAAZE00000007exon5745137057451386-
GWHAAZE00000007CDS5745137057451386-
GWHAAZE00000007CDS5745070757450918-
GWHAAZE00000007CDS5744948157449602-
GWHAAZE00000007CDS5744864157448726-
GWHAAZE00000007CDS5744768757447781-
GWHAAZE00000007CDS5744742957447510-
GWHAAZE00000007CDS5744695257447058-
GWHAAZE00000007CDS5744595957445989-
GWHAAZE00000007CDS5744578257445821-
Transcript Sequence

Network for GWHGAAZE025212

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12971.8NAGLU_N6511.10E-12
PF05089.13NAGLU682531.90E-77
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01205NAGLU Metabolic pathways map01100
Glycosaminoglycan degradationmap00531
Lysosomemap04142

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.708
SRR3591706second leaf10.343
SRR3591707mature leaf9.010
SRR3591708Shoot apex7.247
SRR3591709Stem6.962
SRR3591710White floral bud2.184
SRR3591711White flower1.933
SRR3591712Green floral bud1.879
SRR3591713Yellow flower1.421
SRP173429 SRR8316895Juvenile bud stage 13.895
SRR8316896Juvenile bud stage 18.441
SRR8316897Juvenile bud stage 6.138
SRR8316894Third green stage 8.029
SRR8316900Third green stage 24.344
SRR8316901Third green stage 18.860
SRR8316898Complete white stage 14.598
SRR8316899Complete white stage 34.997
SRR8316903Complete white stage 24.948
SRR8316902Silver flowering stage10.079
SRR8316904Silver flowering stage18.402
SRR8316905Silver flowering stage7.336
SRR8316906Gold flowering stage 19.297
SRR8316907Gold flowering stage 16.172
SRR8316908Gold flowering stage 16.967
SRP132670SRR6706286Control22.463
SRR6706287Light intensity 50%23.112
SRR6706288Light intensity 20%26.857
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.436
CNS0095593Slightly white alabastrum(diploid) 25.553
CNS0095594Slightly white alabastrum(diploid) 35.555
CNS0095595Whole white alabastrum(diploid) 26.690
CNS0095596Whole white alabastrum(diploid) 35.870
CNS0095597Whole white alabastrum(diploid) 46.758
CNS0095598Silvery flower (diploied) 113.029
CNS0095599Silvery flower (diploied) 210.697
CNS0095600Silvery flower (diploied) 327.779
CNS0095601Golden flower (diploid) 17.705
CNS0095602Golden flower (diploid) 217.848
CNS0095603Golden flower (diploid) 318.864
CNS0095604Slightly white alabastrum(tetraploid) 18.463
CNS0095605Slightly white alabastrum(tetraploid) 24.783
CNS0095606Slightly white alabastrum(tetraploid) 322.934
CNS0095607Whole white alabastrum(tetraploid) 13.653
CNS0095608Whole white alabastrum(tetraploid) 23.203
CNS0095609Whole white alabastrum(tetraploid) 314.114
CNS0095610Silvery flower (tetraploid) 122.580
CNS0095611Silvery flower (tetraploid) 221.633
CNS0095612Silvery flower (tetraploid) 316.549
CNS0095613Golden flower (tetraploid) 14.199
CNS0095614Golden flower (tetraploid) 211.326
CNS0095615Golden flower (tetraploid) 37.673
CRA001975CRR073297Stem 113.335
CRR073298Stem 212.979
CRR073299Stem 38.634
CRR073300Leaf 120.736
CRR073301Leaf 214.269
CRR073302Leaf 314.230
CRR073303Juvenile bud 112.260
CRR073304Juvenile bud 210.373
CRR073305Juvenile bud 314.949
CRR073306Third green 17.106
CRR073307Third green 27.242
CRR073308Third green 39.762
CRR073309Second white 19.309
CRR073310Second white 26.443
CRR073311Second white 34.896
CRR073312Silver flowering 11.605
CRR073313Silver flowering 23.134
CRR073314Silver flowering 32.950
CRR073315Gold flowering 11.527
CRR073316Gold flowering 25.185
CRR073317Gold flowering 36.229
CRR073318Tawny withering 14.511
CRR073319Tawny withering 23.756
CRR073320Tawny withering 32.965