Detail information of GWHGAAZE025297


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002274361.10PREDICTED: L-aspartate oxidase, chloroplastic [Vitis vinifera]
COGYP_003290584.10L-aspartate oxidase
Swissprottr|Q94AY1|NADB_ARATH0L-aspartate oxidase, chloroplastic (Precursor)
trEMBLtr|F6HUZ5|F6HUZ5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB58513.1}
TAIR10AT5G14760.10L-aspartate oxidase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene5919545459200694-
GWHAAZE00000007mRNA5919545459200694-
GWHAAZE00000007exon5919545459196468-
GWHAAZE00000007exon5919662159196682-
GWHAAZE00000007exon5919715059197230-
GWHAAZE00000007exon5919734759197403-
GWHAAZE00000007exon5919799859198240-
GWHAAZE00000007exon5919958959199943-
GWHAAZE00000007exon5920056159200694-
GWHAAZE00000007CDS5920056159200694-
GWHAAZE00000007CDS5919958959199943-
GWHAAZE00000007CDS5919799859198240-
GWHAAZE00000007CDS5919734759197403-
GWHAAZE00000007CDS5919715059197230-
GWHAAZE00000007CDS5919662159196682-
GWHAAZE00000007CDS5919545459196468-
Transcript Sequence

Network for GWHGAAZE025297

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00890.25FAD_binding_2894734.10E-92
PF02910.21Succ_DH_flav_C5296174.20E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00278nadB Metabolic pathways map01100
Alanine, aspartate and glutamate metabolismmap00250
Nicotinate and nicotinamide metabolismmap00760

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0009435biological_processNAD biosynthetic process
GO:0016491molecular_functionoxidoreductase activity
GO:0008734molecular_functionL-aspartate oxidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.767
SRR3591706second leaf5.221
SRR3591707mature leaf17.460
SRR3591708Shoot apex4.568
SRR3591709Stem12.961
SRR3591710White floral bud31.755
SRR3591711White flower20.327
SRR3591712Green floral bud20.004
SRR3591713Yellow flower22.284
SRP173429 SRR8316895Juvenile bud stage 3.149
SRR8316896Juvenile bud stage 4.348
SRR8316897Juvenile bud stage 2.193
SRR8316894Third green stage 1.970
SRR8316900Third green stage 11.632
SRR8316901Third green stage 9.215
SRR8316898Complete white stage 2.900
SRR8316899Complete white stage 4.759
SRR8316903Complete white stage 6.021
SRR8316902Silver flowering stage4.817
SRR8316904Silver flowering stage9.155
SRR8316905Silver flowering stage4.253
SRR8316906Gold flowering stage 19.709
SRR8316907Gold flowering stage 21.881
SRR8316908Gold flowering stage 18.738
SRP132670SRR6706286Control12.488
SRR6706287Light intensity 50%13.557
SRR6706288Light intensity 20%11.026
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.825
CNS0095593Slightly white alabastrum(diploid) 26.512
CNS0095594Slightly white alabastrum(diploid) 36.701
CNS0095595Whole white alabastrum(diploid) 215.371
CNS0095596Whole white alabastrum(diploid) 315.078
CNS0095597Whole white alabastrum(diploid) 424.405
CNS0095598Silvery flower (diploied) 18.201
CNS0095599Silvery flower (diploied) 210.914
CNS0095600Silvery flower (diploied) 36.993
CNS0095601Golden flower (diploid) 15.766
CNS0095602Golden flower (diploid) 27.082
CNS0095603Golden flower (diploid) 37.189
CNS0095604Slightly white alabastrum(tetraploid) 18.921
CNS0095605Slightly white alabastrum(tetraploid) 29.062
CNS0095606Slightly white alabastrum(tetraploid) 34.912
CNS0095607Whole white alabastrum(tetraploid) 125.965
CNS0095608Whole white alabastrum(tetraploid) 244.352
CNS0095609Whole white alabastrum(tetraploid) 322.526
CNS0095610Silvery flower (tetraploid) 18.947
CNS0095611Silvery flower (tetraploid) 28.221
CNS0095612Silvery flower (tetraploid) 317.022
CNS0095613Golden flower (tetraploid) 17.083
CNS0095614Golden flower (tetraploid) 217.348
CNS0095615Golden flower (tetraploid) 317.871
CRA001975CRR073297Stem 18.507
CRR073298Stem 25.385
CRR073299Stem 37.749
CRR073300Leaf 114.626
CRR073301Leaf 211.194
CRR073302Leaf 36.268
CRR073303Juvenile bud 123.120
CRR073304Juvenile bud 222.890
CRR073305Juvenile bud 310.204
CRR073306Third green 1102.416
CRR073307Third green 282.924
CRR073308Third green 394.946
CRR073309Second white 1122.039
CRR073310Second white 272.510
CRR073311Second white 381.844
CRR073312Silver flowering 1138.243
CRR073313Silver flowering 2220.793
CRR073314Silver flowering 3181.746
CRR073315Gold flowering 117.110
CRR073316Gold flowering 214.141
CRR073317Gold flowering 312.744
CRR073318Tawny withering 112.469
CRR073319Tawny withering 217.613
CRR073320Tawny withering 316.090