Detail information of GWHGAAZE025348


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6002065160023832+
GWHAAZE00000007mRNA6002065160023832+
GWHAAZE00000007exon6002065160020781+
GWHAAZE00000007exon6002105660021188+
GWHAAZE00000007exon6002131160021506+
GWHAAZE00000007exon6002218360022307+
GWHAAZE00000007exon6002242360022581+
GWHAAZE00000007exon6002351860023832+
GWHAAZE00000007CDS6002065160020781+
GWHAAZE00000007CDS6002105660021188+
GWHAAZE00000007CDS6002131160021506+
GWHAAZE00000007CDS6002218360022307+
GWHAAZE00000007CDS6002242360022581+
GWHAAZE00000007CDS6002351860023832+
Transcript Sequence

Network for GWHGAAZE025348

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0025


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf49.431
SRR3591706second leaf17.700
SRR3591707mature leaf25.704
SRR3591708Shoot apex27.679
SRR3591709Stem55.902
SRR3591710White floral bud18.813
SRR3591711White flower24.519
SRR3591712Green floral bud35.009
SRR3591713Yellow flower14.904
SRP173429 SRR8316895Juvenile bud stage 25.560
SRR8316896Juvenile bud stage 25.390
SRR8316897Juvenile bud stage 18.212
SRR8316894Third green stage 10.921
SRR8316900Third green stage 39.369
SRR8316901Third green stage 30.064
SRR8316898Complete white stage 7.226
SRR8316899Complete white stage 62.004
SRR8316903Complete white stage 9.779
SRR8316902Silver flowering stage7.625
SRR8316904Silver flowering stage5.882
SRR8316905Silver flowering stage3.760
SRR8316906Gold flowering stage 12.675
SRR8316907Gold flowering stage 11.002
SRR8316908Gold flowering stage 14.093
SRP132670SRR6706286Control19.257
SRR6706287Light intensity 50%19.145
SRR6706288Light intensity 20%19.963
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.853
CNS0095593Slightly white alabastrum(diploid) 224.900
CNS0095594Slightly white alabastrum(diploid) 317.405
CNS0095595Whole white alabastrum(diploid) 220.715
CNS0095596Whole white alabastrum(diploid) 318.713
CNS0095597Whole white alabastrum(diploid) 417.913
CNS0095598Silvery flower (diploied) 132.694
CNS0095599Silvery flower (diploied) 226.488
CNS0095600Silvery flower (diploied) 322.756
CNS0095601Golden flower (diploid) 134.259
CNS0095602Golden flower (diploid) 230.349
CNS0095603Golden flower (diploid) 329.877
CNS0095604Slightly white alabastrum(tetraploid) 113.460
CNS0095605Slightly white alabastrum(tetraploid) 211.488
CNS0095606Slightly white alabastrum(tetraploid) 331.258
CNS0095607Whole white alabastrum(tetraploid) 18.819
CNS0095608Whole white alabastrum(tetraploid) 25.637
CNS0095609Whole white alabastrum(tetraploid) 318.350
CNS0095610Silvery flower (tetraploid) 114.759
CNS0095611Silvery flower (tetraploid) 214.498
CNS0095612Silvery flower (tetraploid) 310.674
CNS0095613Golden flower (tetraploid) 17.277
CNS0095614Golden flower (tetraploid) 211.544
CNS0095615Golden flower (tetraploid) 312.499
CRA001975CRR073297Stem 139.584
CRR073298Stem 237.430
CRR073299Stem 331.567
CRR073300Leaf 148.479
CRR073301Leaf 247.493
CRR073302Leaf 338.129
CRR073303Juvenile bud 142.312
CRR073304Juvenile bud 221.893
CRR073305Juvenile bud 348.411
CRR073306Third green 16.946
CRR073307Third green 27.395
CRR073308Third green 37.115
CRR073309Second white 16.922
CRR073310Second white 27.648
CRR073311Second white 38.538
CRR073312Silver flowering 16.561
CRR073313Silver flowering 26.127
CRR073314Silver flowering 36.355
CRR073315Gold flowering 121.209
CRR073316Gold flowering 229.689
CRR073317Gold flowering 317.803
CRR073318Tawny withering 149.974
CRR073319Tawny withering 248.872
CRR073320Tawny withering 356.015