Detail information of GWHGAAZE025351


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP46401.10hypothetical protein JCGZ_10241 [Jatropha curcas]
COGYP_004985011.11E-11glycosyl transferase group 1 (modular protein), partial
trEMBLtr|A0A067LD42|A0A067LD42_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP46401.1}
TAIR10AT3G27540.11E-177beta-1,4-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6005532860056434-
GWHAAZE00000007mRNA6005532860056434-
GWHAAZE00000007exon6005532860056434-
GWHAAZE00000007CDS6005532860056434-
Transcript Sequence

Network for GWHGAAZE025351

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04724.14Glyco_transf_17223661.60E-179
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00737MGAT3 Metabolic pathways map01100
N-Glycan biosynthesismap00510

Gene Ontology

GO term OntologyName
GO:0006487biological_processprotein N-linked glycosylation
GO:0016020cellular_componentmembrane
GO:0003830molecular_functionbeta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.378
SRR3591706second leaf10.286
SRR3591707mature leaf8.564
SRR3591708Shoot apex10.244
SRR3591709Stem7.513
SRR3591710White floral bud30.700
SRR3591711White flower9.547
SRR3591712Green floral bud28.308
SRR3591713Yellow flower4.587
SRP173429 SRR8316895Juvenile bud stage 5.313
SRR8316896Juvenile bud stage 6.333
SRR8316897Juvenile bud stage 2.803
SRR8316894Third green stage 3.590
SRR8316900Third green stage 15.426
SRR8316901Third green stage 12.386
SRR8316898Complete white stage 4.716
SRR8316899Complete white stage 11.513
SRR8316903Complete white stage 6.298
SRR8316902Silver flowering stage2.204
SRR8316904Silver flowering stage4.462
SRR8316905Silver flowering stage1.726
SRR8316906Gold flowering stage 3.999
SRR8316907Gold flowering stage 2.944
SRR8316908Gold flowering stage 4.522
SRP132670SRR6706286Control4.270
SRR6706287Light intensity 50%4.450
SRR6706288Light intensity 20%5.154
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.382
CNS0095593Slightly white alabastrum(diploid) 28.716
CNS0095594Slightly white alabastrum(diploid) 39.620
CNS0095595Whole white alabastrum(diploid) 225.302
CNS0095596Whole white alabastrum(diploid) 327.253
CNS0095597Whole white alabastrum(diploid) 441.941
CNS0095598Silvery flower (diploied) 18.327
CNS0095599Silvery flower (diploied) 28.182
CNS0095600Silvery flower (diploied) 39.158
CNS0095601Golden flower (diploid) 15.981
CNS0095602Golden flower (diploid) 28.884
CNS0095603Golden flower (diploid) 37.646
CNS0095604Slightly white alabastrum(tetraploid) 117.079
CNS0095605Slightly white alabastrum(tetraploid) 217.428
CNS0095606Slightly white alabastrum(tetraploid) 39.059
CNS0095607Whole white alabastrum(tetraploid) 141.316
CNS0095608Whole white alabastrum(tetraploid) 259.032
CNS0095609Whole white alabastrum(tetraploid) 323.436
CNS0095610Silvery flower (tetraploid) 14.016
CNS0095611Silvery flower (tetraploid) 27.127
CNS0095612Silvery flower (tetraploid) 39.399
CNS0095613Golden flower (tetraploid) 13.210
CNS0095614Golden flower (tetraploid) 22.727
CNS0095615Golden flower (tetraploid) 36.373
CRA001975CRR073297Stem 14.033
CRR073298Stem 24.176
CRR073299Stem 33.377
CRR073300Leaf 17.862
CRR073301Leaf 25.565
CRR073302Leaf 33.950
CRR073303Juvenile bud 18.947
CRR073304Juvenile bud 29.610
CRR073305Juvenile bud 33.477
CRR073306Third green 14.351
CRR073307Third green 24.687
CRR073308Third green 34.148
CRR073309Second white 12.053
CRR073310Second white 21.764
CRR073311Second white 31.840
CRR073312Silver flowering 14.019
CRR073313Silver flowering 23.602
CRR073314Silver flowering 33.067
CRR073315Gold flowering 110.294
CRR073316Gold flowering 210.557
CRR073317Gold flowering 317.961
CRR073318Tawny withering 14.732
CRR073319Tawny withering 23.181
CRR073320Tawny withering 34.600