Gene detail

Detail information of GWHGAAZE025393

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006469975.1	0	PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like [Citrus sinensis]
COG	YP_005366914.1	7E-124	glucose-6-phosphate 1-dehydrogenase
Swissprot	tr\|Q9FJI5\|G6PD6_ARATH	0	Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2
trEMBL	tr\|A7YVW2\|A7YVW2_ACTCH	0	Glucose-6-phosphate 1-dehydrogenase {ECO:0000256\|RuleBase:RU000497}
TAIR10	AT5G40760.1	0	glucose-6-phosphate dehydrogenase 6

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	60579984	60588440	+
GWHAAZE00000007	mRNA	60579984	60588440	+
GWHAAZE00000007	exon	60579984	60580157	+
GWHAAZE00000007	exon	60580387	60580472	+
GWHAAZE00000007	exon	60580870	60580936	+
GWHAAZE00000007	exon	60581024	60581210	+
GWHAAZE00000007	exon	60581901	60582058	+
GWHAAZE00000007	exon	60582154	60582222	+
GWHAAZE00000007	exon	60583190	60583248	+
GWHAAZE00000007	exon	60583467	60583503	+
GWHAAZE00000007	exon	60583653	60583724	+
GWHAAZE00000007	exon	60585169	60585316	+
GWHAAZE00000007	exon	60585493	60585588	+
GWHAAZE00000007	exon	60586248	60586318	+
GWHAAZE00000007	exon	60586845	60586960	+
GWHAAZE00000007	exon	60588131	60588176	+
GWHAAZE00000007	exon	60588273	60588440	+
GWHAAZE00000007	CDS	60579984	60580157	+
GWHAAZE00000007	CDS	60580387	60580472	+
GWHAAZE00000007	CDS	60580870	60580936	+
GWHAAZE00000007	CDS	60581024	60581210	+
GWHAAZE00000007	CDS	60581901	60582058	+
GWHAAZE00000007	CDS	60582154	60582222	+
GWHAAZE00000007	CDS	60583190	60583248	+
GWHAAZE00000007	CDS	60583467	60583503	+
GWHAAZE00000007	CDS	60583653	60583724	+
GWHAAZE00000007	CDS	60585169	60585316	+
GWHAAZE00000007	CDS	60585493	60585588	+
GWHAAZE00000007	CDS	60586248	60586318	+
GWHAAZE00000007	CDS	60586845	60586960	+
GWHAAZE00000007	CDS	60588131	60588176	+
GWHAAZE00000007	CDS	60588273	60588440	+

Transcript Sequence
>GWHTAAZE025427 ATGGCATCAGGCTGTTGGTCCATGGAGAAAAGAGCTCCTTATGCAAACGAGAATAATTCAAAAGACAACGAGGATGCACCTGAAACTGGCTGTCTTTCCATTGTTGTGCTTGGTGCTTCTGGTGATCTTGCTAAGAAAAAGACTTTCCCCGCACTCTTCAACCTTTACCGACAGGGATTCTTGCAATCAAATGAAGTTCACATTTTTGGCTATGCAAGGACCAAGATTTCAGATGATGAATTGAGAAATCGCATTCGTGGATATCTTATCCCGAGCAAAGGTGCTTCAACAGAACAAGCAGAAAACGTGTCAAAGTTTCTGCAATTGATCAAATATGTAAGTGGCTCTTATGATTCCGAGGAGGGTTTTCAGTCACTGGATAAGGCAATATATGCACATGAAGTATCTACAAAAGTTGCAGAAGGATCAGCTCGTAGACTCTTCTATCTCGCGCTTCCTCCATCAGTATATCCCCCTGTCTGCAAAATGATAAAGAAGTGTTGCATGAATAAGTCCGATCTTGGTGGATGGACTCGGATTGTAATTGAGAAGCCTTTTGGCAAAGATTTGGATTCAGCAGAGCAACTCAGTAACCAAATAGGAGAGTTGTTTGATGAACCACAGATTTACCGTATTGATCATTACTTAGGGAAGGAATTGGTGCAGAACTTGTTGGTTCTTCGCTTTGCAAATCGCTTCTTCTTGCCGCTTTGGAACCGCGACAACATTGATAACGTACAGATCGTGTTTAGAGAAGATTTTGGAACTGAAGGCCGTGGTGGATATTTTGATGAATATGGAATTATCCGTGATATTATTCAAAATCATCTACTGCAGGTTCTGTGTCTTGTTGCTATGGAGAAGCCTGTATCTCTTAAGCCTGAGCACATCCGAGATGAGAAAGTGAAGGTTCTTCAATCAGTTCAACCACTTAAAGATGAAGAGGTGGTGCTCGGACAATATGATGGCTATACGGAGGACCCAACAGTTCCTGACAACTCAAACACCCCCACTTTTGCAACTGCAATTCTGCGAATACATAATGAAAGATGGGAAGGTGTTCCCTTTATACTCAAGGCAGGGAAAGCTTTAAATTCCAGGAAGGCAGAAATACGTGTTCAATTTAAGGATGTTCCTGGTGATATATTCAAATGTCAAAAGCAAGGGAGGAATGAATTTGTAATACGACTGCAACCTTCAGAGGCCATTTACATGAAACTTACGGTGAAGCAACCTGGACTTGATATGTCAACTGCTCAGAGTGAACTCGACTTGTCCTATATGCAGCGTTACCAAGGTGTTACCATTCCAGAGGCCTATGAACGTCTAATTCTTGATACGATAAGGGGTGATCAGCAACATTTTGTTCGCAGAGATGAATTGAGGGCGGCATGGGAGATTTTCACACCGCTCCTGCACAGAATAGATAAAGGCGAACTCAAATCAATTCCATACAAGCCAGGTAGCCGAGGCCCAGTGGAAGCAGATCAGTTACTTGAAAGAGCCGGTTATGTTCAAACACATGGCTACATATGGATCCCTCCGACCTTATAG

Network for GWHGAAZE025393

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00479.23	G6PD_N	35	223	5.90E-61
PF02781.17	G6PD_C	225	504	2.90E-115

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00036	G6PD, zwf	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Pentose phosphate pathway	map00030
		Glutathione metabolism	map00480

Gene Ontology

GO term	Ontology	Name
GO:0006006	biological_process	glucose metabolic process
GO:0055114	biological_process	oxidation-reduction process
GO:0004345	molecular_function	glucose-6-phosphate dehydrogenase activity
GO:0050661	molecular_function	NADP binding
GO:0016614	molecular_function	oxidoreductase activity, acting on CH-OH group of donors

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	175.533
	SRR3591706	second leaf	82.786
	SRR3591707	mature leaf	56.621
	SRR3591708	Shoot apex	109.190
	SRR3591709	Stem	142.749
	SRR3591710	White floral bud	109.132
	SRR3591711	White flower	130.927
	SRR3591712	Green floral bud	189.423
	SRR3591713	Yellow flower	117.915
SRP173429	SRR8316895	Juvenile bud stage	81.591
	SRR8316896	Juvenile bud stage	115.009
	SRR8316897	Juvenile bud stage	60.728
	SRR8316894	Third green stage	50.722
	SRR8316900	Third green stage	130.135
	SRR8316901	Third green stage	125.224
	SRR8316898	Complete white stage	51.873
	SRR8316899	Complete white stage	169.795
	SRR8316903	Complete white stage	87.592
	SRR8316902	Silver flowering stage	41.184
	SRR8316904	Silver flowering stage	58.316
	SRR8316905	Silver flowering stage	26.708
	SRR8316906	Gold flowering stage	106.966
	SRR8316907	Gold flowering stage	101.270
	SRR8316908	Gold flowering stage	121.348
SRP132670	SRR6706286	Control	74.036
	SRR6706287	Light intensity 50%	90.138
	SRR6706288	Light intensity 20%	98.793
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	89.706
	CNS0095593	Slightly white alabastrum(diploid) 2	105.085
	CNS0095594	Slightly white alabastrum(diploid) 3	79.477
	CNS0095595	Whole white alabastrum(diploid) 2	96.764
	CNS0095596	Whole white alabastrum(diploid) 3	68.063
	CNS0095597	Whole white alabastrum(diploid) 4	88.782
	CNS0095598	Silvery flower (diploied) 1	93.451
	CNS0095599	Silvery flower (diploied) 2	80.554
	CNS0095600	Silvery flower (diploied) 3	113.999
	CNS0095601	Golden flower (diploid) 1	68.065
	CNS0095602	Golden flower (diploid) 2	108.809
	CNS0095603	Golden flower (diploid) 3	105.788
	CNS0095604	Slightly white alabastrum(tetraploid) 1	100.371
	CNS0095605	Slightly white alabastrum(tetraploid) 2	83.012
	CNS0095606	Slightly white alabastrum(tetraploid) 3	190.715
	CNS0095607	Whole white alabastrum(tetraploid) 1	62.722
	CNS0095608	Whole white alabastrum(tetraploid) 2	59.986
	CNS0095609	Whole white alabastrum(tetraploid) 3	121.687
	CNS0095610	Silvery flower (tetraploid) 1	120.144
	CNS0095611	Silvery flower (tetraploid) 2	127.369
	CNS0095612	Silvery flower (tetraploid) 3	85.061
	CNS0095613	Golden flower (tetraploid) 1	85.689
	CNS0095614	Golden flower (tetraploid) 2	111.791
	CNS0095615	Golden flower (tetraploid) 3	72.188
CRA001975	CRR073297	Stem 1	134.855
	CRR073298	Stem 2	120.180
	CRR073299	Stem 3	111.436
	CRR073300	Leaf 1	143.571
	CRR073301	Leaf 2	114.312
	CRR073302	Leaf 3	121.507
	CRR073303	Juvenile bud 1	161.348
	CRR073304	Juvenile bud 2	119.412
	CRR073305	Juvenile bud 3	167.594
	CRR073306	Third green 1	42.028
	CRR073307	Third green 2	34.452
	CRR073308	Third green 3	41.114
	CRR073309	Second white 1	73.917
	CRR073310	Second white 2	50.549
	CRR073311	Second white 3	48.763
	CRR073312	Silver flowering 1	53.343
	CRR073313	Silver flowering 2	58.479
	CRR073314	Silver flowering 3	42.881
	CRR073315	Gold flowering 1	50.958
	CRR073316	Gold flowering 2	66.391
	CRR073317	Gold flowering 3	55.461
	CRR073318	Tawny withering 1	89.109
	CRR073319	Tawny withering 2	86.573
	CRR073320	Tawny withering 3	98.423