Gene detail

Detail information of GWHGAAZE025507

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011096825.1	5.39742E-67	PREDICTED: uncharacterized protein LOC105175885 [Sesamum indicum]
COG	YP_007122748.1	1E-15	acetyltransferase
trEMBL	tr\|A5AT20\|A5AT20_VITVI	1E-66	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN78264.1}
TAIR10	AT1G72030.1	6E-39	Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	62166696	62168676	+
GWHAAZE00000007	mRNA	62166696	62168676	+
GWHAAZE00000007	exon	62166696	62166784	+
GWHAAZE00000007	exon	62167207	62167314	+
GWHAAZE00000007	exon	62167510	62167686	+
GWHAAZE00000007	exon	62168451	62168676	+
GWHAAZE00000007	CDS	62166696	62166784	+
GWHAAZE00000007	CDS	62167207	62167314	+
GWHAAZE00000007	CDS	62167510	62167686	+
GWHAAZE00000007	CDS	62168451	62168676	+

Transcript Sequence
>GWHTAAZE025541 ATGTGTAAAGCTTCTTCTGCTAAAGAGAGTTTCACCACTCAACTGTTTGATGGAAAAGATTATCATAAACGGTTTCCTTTGCAGTTCTTAAAATCTCTCTCTCTGAGTGTAGTCCTAACAATTTGTTGCACTCATACATCATACAGTGAAGTGTTTTCAGGACTTCTGTATAGACTTAGGAACTCACCATCAGACAGGTATGCATGTTTGGTTGCTGAATCCGCTAGTAATGCTCATGCTCCTGAGCAAGGGTGGAAGATTGCGGGAGTTGTTGATGTCACAGTCTTGAGGGATGAGGATGTTCTTCAGCATCTCCCTGCAGGTGTCAACGAATACCTCTACGTCTCCGGTATAGCTGTCTTAAGCAATTTCAGGAGGCGGAAAGTAGCAACTACGTTGCTGAGAGGCTGTGAAATTTTGTCTCTTCGATGGGGTTACAAATATCTTGTCCTAAGGGCTTATGAAGATGACTTGGGTGCTCGCAAATTGTACACAAACGCAGGATACGAAATGGTCTCAGGCGATCCTCCTTGGACTACTACATGGATTGGGCGAAAACGTCGTGTTCTTATGATCAAACGATCTGCTAAACATATGTAA

Network for GWHGAAZE025507

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.26	Acetyltransf_1	87	169	2.90E-07

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	molecular_function	N-acetyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	14.344
	SRR3591706	second leaf	38.269
	SRR3591707	mature leaf	35.871
	SRR3591708	Shoot apex	29.478
	SRR3591709	Stem	8.734
	SRR3591710	White floral bud	0.975
	SRR3591711	White flower	2.612
	SRR3591712	Green floral bud	2.996
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	4.459
	SRR8316896	Juvenile bud stage	5.339
	SRR8316897	Juvenile bud stage	3.072
	SRR8316894	Third green stage	1.902
	SRR8316900	Third green stage	5.911
	SRR8316901	Third green stage	2.949
	SRR8316898	Complete white stage	1.213
	SRR8316899	Complete white stage	2.075
	SRR8316903	Complete white stage	1.088
	SRR8316902	Silver flowering stage	0.406
	SRR8316904	Silver flowering stage	0.627
	SRR8316905	Silver flowering stage	0.111
	SRR8316906	Gold flowering stage	0.743
	SRR8316907	Gold flowering stage	0.210
	SRR8316908	Gold flowering stage	1.030
SRP132670	SRR6706286	Control	2.588
	SRR6706287	Light intensity 50%	2.349
	SRR6706288	Light intensity 20%	2.536
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	5.662
	CNS0095593	Slightly white alabastrum(diploid) 2	4.896
	CNS0095594	Slightly white alabastrum(diploid) 3	5.262
	CNS0095595	Whole white alabastrum(diploid) 2	3.570
	CNS0095596	Whole white alabastrum(diploid) 3	3.550
	CNS0095597	Whole white alabastrum(diploid) 4	2.645
	CNS0095598	Silvery flower (diploied) 1	8.618
	CNS0095599	Silvery flower (diploied) 2	7.486
	CNS0095600	Silvery flower (diploied) 3	1.582
	CNS0095601	Golden flower (diploid) 1	6.822
	CNS0095602	Golden flower (diploid) 2	4.263
	CNS0095603	Golden flower (diploid) 3	4.754
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.134
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.467
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.595
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.699
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.926
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.574
	CNS0095610	Silvery flower (tetraploid) 1	0.365
	CNS0095611	Silvery flower (tetraploid) 2	2.589
	CNS0095612	Silvery flower (tetraploid) 3	2.836
	CNS0095613	Golden flower (tetraploid) 1	0.431
	CNS0095614	Golden flower (tetraploid) 2	0.878
	CNS0095615	Golden flower (tetraploid) 3	1.352
CRA001975	CRR073297	Stem 1	9.911
	CRR073298	Stem 2	10.793
	CRR073299	Stem 3	10.385
	CRR073300	Leaf 1	5.100
	CRR073301	Leaf 2	5.537
	CRR073302	Leaf 3	4.457
	CRR073303	Juvenile bud 1	3.968
	CRR073304	Juvenile bud 2	2.075
	CRR073305	Juvenile bud 3	4.221
	CRR073306	Third green 1	0.600
	CRR073307	Third green 2	0.729
	CRR073308	Third green 3	0.272
	CRR073309	Second white 1	0.125
	CRR073310	Second white 2	0.531
	CRR073311	Second white 3	0.262
	CRR073312	Silver flowering 1	0.156
	CRR073313	Silver flowering 2	0.755
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	54.528
	CRR073316	Gold flowering 2	55.620
	CRR073317	Gold flowering 3	37.949
	CRR073318	Tawny withering 1	12.604
	CRR073319	Tawny withering 2	7.574
	CRR073320	Tawny withering 3	8.393